Brassica napus (rape): 106401980
Help
Entry
106401980 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106401980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106401980
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106401980
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
HECT type E3
106401980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
106401980
NCBI-ProteinID:
XP_013698063
LinkDB
All DBs
Position
C1:complement(42930854..42937937)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKEGDARRLLEQTRMERNRRLLQKQHNSAALKIQKFFRGRR
SMAIERFKVRRDFCETYGDNCQNVDRHCFEPASSFLPQFLFFFKAQSSGDFVMLVETCRL
LRQFAHSCGDILSFFSGLDYSTEHNTVDFRVKKLAFTCIEAIHQNRERLRDQLLVTPEEA
TISTAILMDAMSLLLDPKLPWVCKIVSYLQKRNIFKLVREIVTTAKEGSRSPTMNGSILS
LESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVH
QMALCIQKDTHVLPIDTNTEFPGYACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLL
ETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILF
HQVSGVTQSYDEDKEALAIGTGSSFLYAAFNILPLERIMTVMAYRTELVAVLWNYMKRCH
ENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDIRLL
IIILKQALWQLLWVNPLTQHNSGKSVSNDLSKKNRVDLIQNRVGVVVAELLSQFQDWNNR
QQFTSSTDFQADTVREYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSH
GSEEMFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFK
DFMEKITLAAFDVQYGLFKETADHMLYPNPGSGMIHGQHLHFFHFLGSLLAKAMFEGILV
DIPFATFFVSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGER
TEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNE
HELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTG
CSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMY
AISAEAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccgtcgactcggaagcgtgtcgatttaggtggccggagcacc
aaggagggagatgctcgcaggcttcttgagcagaccaggatggagcgtaatcgtcgtctc
ctgcagaagcagcacaactccgccgccctcaaaattcagaaattctttagaggtagaaga
tcaatggccattgagcgcttcaaggtgaggcgtgacttctgtgaaacctatggtgataat
tgccagaatgtcgataggcattgctttgagccagcttctagtttcctccctcagtttctg
tttttcttcaaggcgcaaagctcgggagattttgtgatgcttgtggagacgtgtcgtcta
ctgcgacagtttgcgcacagctgtggtgacattctaagctttttctctggcttggactac
tctactgagcataatacggtggattttagagtaaagaaacttgcatttacctgcatcgag
gctatacatcagaatagggaacgtttaagggatcagctcttagttactcccgaagaagct
accatttcaacagctatcttgatggatgcgatgtcgttgttgctagatcctaagctgcct
tgggtttgcaaaatagttagctatctacagaaaagaaacatattcaaactggtccgagaa
attgtgactacggctaaggaaggctcaagaagtccgactatgaacggcagcatcctttcg
ctagaaagtgtattgtttctggtagtaccacacgttggccgtgagccatgttgctgccct
gttgttgatccacgttggagtttctcatctatgatccttaccataccctttatatggcag
ctcttcccaaacttgaaagtggtctttgctaacccaagtctaagtcaacactacgttcac
cagatggctttatgtatccaaaaggatacacatgttctcccaatagatacaaacacagaa
tttcctggttatgcttgtcttcttggtaatacattggaaattgcaaacgtggtcttgtca
cagcctgaatgttcattggacatggcaattgacattgcatcagttgcaactttcttattg
gagacacttcctcctattaagtcatcagaaagagaaagcagacatagctcttctgaagag
gatgatgatatgttgattgacgatgtacaagaattagtcttgaataggactttggagcag
cagataactaccaatgctatagactcacgttttcttctgcagttaacaaatattttgttc
catcaagtttcgggtgttacgcagtcatatgacgaagataaagaagcactagctattggc
acaggcagttcttttctgtatgcggcattcaacattctccctcttgagcgaataatgaca
gttatggcttatagaaccgagcttgtagctgtgttgtggaattatatgaagcgatgccat
gagaaccagaagtggtcatccatgcctagtgtcctagcttatcttccagcggattccccg
ggttggctattacctctggttgtgttttgtcctgtttataagcatatgcttacgattgtc
gataatgaggaattttacgaacgaggaaagccactatcgctacaagatatcaggttgctc
atcatcattctcaagcaagctttatggcagttactgtgggtgaatccacttacgcaacat
aactctgggaaatctgtctccaacgacctctcaaagaagaaccgtgttgacttaattcag
aacagggttggggttgtagtcgccgagttactttcacagtttcaagattggaacaaccgg
caacaattcacttcctcgaccgactttcaagctgatacagtccgtgaatattttatcact
caggctatagtggaaggtacaagagccagctacatactgatgcaggctcctttcctgatt
ccgtttacaagcagagtcaaaatattcacaacacaattagcaacggcgaggcagagtcat
ggatctgaagaaatgtttgctggaaatcggtttagaatacgaagagatcacatcttggat
gatgcttacaatcaaatgagtgcattgtcagaggatgatctccgaggaccaattcgtgtg
acatttgtcaatgaactcggagttgaggaagccggtattgatggtggtggcattttcaaa
gactttatggagaaaattaccctagcagcctttgatgtgcaatatgggttgtttaaggaa
accgctgatcacatgctttatcctaatcctggatcaggaatgatacatggacagcatctc
cacttctttcattttctcggcagtcttctcgcaaaagctatgtttgaagggattctagtt
gatataccatttgcaacttttttcgtcagcaaattgaaacaaaagtacaactatttgaac
gatctgccctctctggatcctgagttgtatcggcatcttatatttctgaagcgttataag
ggtgatatatcagacttggagctttactttgttattctgaacaatgagtatggagagaga
acagaggaagagctacttccagggggcaaagacatgcgagtcacaaataagaatgttata
actttcattcatctggtttccaatcatcggttaaactttcagatacgtcagcagagttct
catttcttgagggggtttcagcaactcattccgagggaatggatagacatgtttaatgaa
catgagctccaggttctcatatctggttcagctgatagtttggatattgacgacttgcga
gagaacaccaattattctggaggctacaacgctggacattatgtgattgatatgttctgg
gaagtaatgaaaagcttctcaaccgaaaaccagaagaagttcttgaaatttgtaacgggt
tgttcaagaggaccactgctcggtttcaagtacttggaacctgcattctgtatacagagg
gctggtggtagcgtgagtaatgaagcagttgatagactaccgacatcagccacttgtatg
aaccttcttaagctcccaccctatcaaagtaaagagcaacttgagaccaaattgatgtac
gccataagcgcagaagcaggctttgatctgagctga
DBGET
integrated database retrieval system
