Brassica napus (rape): 106402038
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Entry
106402038 CDS
T04128
Name
(RefSeq) chloride channel protein CLC-b-like isoform X1
KO
K05016
chloride channel 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106402038
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106402038
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106402038
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106402038
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106402038
Ion channels [BR:
bna04040
]
Chloride channels
Chloride channel (CLC)
106402038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
Motif
Other DBs
NCBI-GeneID:
106402038
NCBI-ProteinID:
XP_013698140
LinkDB
All DBs
Position
A2:25263958..25267339
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AA seq
736 aa
AA seq
DB search
MGEVTNHIGTSINYNGEEREQGDAESNTLNQPLVKANRKLSSTPLALVGTKVSHIESLDY
EINENDLFKHDWRKRSKTQVLQYIFLKWTFACLVGLFTGLIATLINLAVENIAGYKLLAV
GHFLAQERYVTGLMMFAGANLGLTLIASVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFG
ATTMFVKIIGSIGAVAAGLDLGKEGPLVHIGTCIASLLGQGGTDNHRIKWRWLRYFNNDR
DRRDLITCGSAAGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRGFIE
ICKSGKCGLFGSGGLIMFDVSHVTYTYHVTDIIPVTLIGVIGGVLGSLYNHFLHKVLRLY
NLINAKGKIHKVLLSLSVSLFTSVCLYGLPFLATCKPCDPSIKERCPTNGRSGNFKQFHC
PKGHYSDLATLLLTTNVDAVRNIFSSNTPNEFSMGSLWIFFVLYCILGLFTFGIATPSGL
FLPIILMGSAYGRMLGGVMGSYTSIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNL
LLLPITMIVLLIAKTVGDSFNPSIYDIILHLKGLPFLEANPEPWMRNLSVGDLGDAKPPV
VTLQGVEKVARIVDVLKNTTHNAFPVLDEAQVVPQVGLANGAIELHGLILRAHLVKVLKK
RWFLTEKRRTEEWEVREKFPWDELAEREDNFDDVAITSSEMQMYVDLHPLTNTTPYTVME
NMSVAKALVLFRCLLW
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagttacaaaccatattggtactagtattaattacaatggagaagaaagagaa
caaggagacgcagagagcaacacactgaaccaacctcttgttaaggctaatcgaaaactt
tcttccacaccacttgctttggtcggcaccaaagtttctcacatcgagagcttggattat
gaaataaacgagaacgatttgtttaagcatgattggagaaaaagatcaaaaacacaagtg
cttcagtacatattcttgaaatggacatttgcttgtcttgtcggtctattcactggtctt
atcgccactctcatcaacttagccgttgaaaacattgctggctacaagcttttagcagtt
ggtcacttccttgcacaagaaagatatgtaacaggtctgatgatgtttgctggagccaat
ttgggactgacgttgattgcatctgtgctttgtgtgtgctttgctcccacggcggctggt
cctggcatccctgagataaaagcttatcttaatggcattgatactcccaacatgtttggt
gctaccactatgttcgttaagatcattggaagcattggagcggttgcagctgggcttgat
ctaggcaaagaaggtcctttggttcacattggaacttgcatagcttctttacttgggcaa
gggggtacagacaatcacaggatcaagtggaggtggctgcgttacttcaataacgataga
gacagaagggatctgattacttgtggctcagcagctggtgtctgtgcagccttcaggtca
cctgtcggaggcgttcttttcgctcttgaggaagtcgccacttggtggagaagcgccttg
ttgtggaggactttcttcagcacagcggttgttgtggtggttctaagagggttcatagag
atctgcaagtcagggaagtgtgggttgtttggaagtggagggcttatcatgtttgatgtg
agtcatgtaacttatacttaccatgtaactgatataatccctgtcaccttgattggtgtc
attggtggagttcttggcagcctctacaatcactttctccataaagttctcagactttac
aatctcatcaacgcgaagggtaagatccacaaggtgcttctaagtctttctgtatctctc
tttacatcagtttgtctctatggtcttcctttcctagctacatgcaagccttgtgacccc
tcaataaaggagagatgtcccacaaatggaagatcaggcaactttaaacagttccattgt
ccaaaaggtcactacagtgatctagctactctgcttctcaccaccaatgttgatgctgta
agaaacatcttctcttccaacactcccaatgagtttagcatgggttccctttggatattc
tttgtactctactgcatcttggggctattcacgtttggtattgcaacgccgtctggtctc
ttcctcccaatcatcctcatgggttctgcatatggtcgtatgcttggtggagtgatggga
tcatacaccagcattgaccaagggctttacgcggttctcggtgcagcttcactcatggca
gggtcgatgagaatgactgtgtcactctgtgttatattccttgaacttaccaacaacctt
cttttgcttcccattacaatgattgtgcttctcattgccaaaactgtgggagacagcttc
aacccaagtatctatgacatcatattgcatcttaaaggtttacctttcttagaagctaat
ccagagccgtggatgaggaacctctcagttggtgatcttggtgatgctaagccacctgtt
gtaaccctgcaaggagtagaaaaggttgctagaatagttgatgtgctaaagaacacaacg
cataatgccttccctgttctagatgaagcacaagtagtacctcaagtgggtctagcaaat
ggagctatagaactccacgggttgatactgagagcgcacctggttaaagttctgaagaag
agatggttcttgacggagaagaggagaacagaggagtgggaggtcagggagaagttccca
tgggatgaattggctgagagagaagacaactttgacgatgtggctatcacaagctctgaa
atgcaaatgtatgttgatcttcatcctcttacaaacacaactccttacacggttatggag
aacatgtctgtggccaaggctttggtgctgttcagatgtctcctgtggtag
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