KEGG   Brassica napus (rape): 106402348
Entry
106402348         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 2, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106402348
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106402348
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106402348
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106402348
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106402348
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106402348
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 106402348
NCBI-ProteinID: XP_013698515
UniProt: A0A816QTN0
LinkDB
Position
C6:complement(43365792..43369490)
AA seq 515 aa
MMALALRRLSSSLKKPIFSNGVSLRSMSSLPTSAMADSERSRSSWIKQLNAPLEEIDPEI
ADIIELEKARQWKGFELIPSENFTSASVMEAVGSVMTNKYSEGYPGARYYGGNEYIDMAE
SLCQKRALEAFHLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGY
QTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYAR
IRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGL
KEVNKQGKEVMYDYEDRINAAVFPGLQGGPHNHTITGLAVALKQVKSPEYKAYQDQVLRN
CSKFAETLLSKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVS
AMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSN
EKLQSEMAKLREMIEEYAKQFPTIGFEKETMRYKE
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgatggcgttggctcttcgcagactatcatcttcccttaagaagcccatcttctcaaat
ggcgtttccctccgttccatgtcgtctttgccaacctcggctatggcggactcggagaga
tctcgttccagttggataaagcaactgaatgcacctctggaagaaatcgatccagaaatc
gcagatattatcgaactcgagaaggctcgtcaatggaagggatttgaacttataccgtcg
gagaatttcacatctgcctcggtgatggaagctgttggctctgttatgactaacaagtat
agtgaaggctaccctggagctagatactatggaggcaatgagtacattgacatggctgag
tcattatgtcaaaaacgcgccctcgaagcttttcacttagatccttccaaatggggagtc
aatgtgcagtctttatcaggatcaccagctaacttccaagtttacaccgcgctacttaaa
cctcatgaaagaatcatggctcttgacttacctcatggtggccatctttctcatggttat
cagactgacacaaagaaaatatctgctgtatccatcttctttgagacaatgccatacaga
ttagatgagagcactggttacattgattacgatcagctagaaaaaagtgcggtgcttttc
agacccaaacttattgttgcgggtgcaagtgcttatgctcgtttatatgactatgcacgt
atccgtaaggtctgtgacaagcaaaaggcggttatgctggcagatatggctcacattagt
gggttggttgcggctggtgttattccttctccttttgagtatgctgatgttgttacgact
acaactcacaaatctcttcgaggtcccagaggggctatgatattctttaggaagggattg
aaagaggttaacaaacaaggaaaagaggtcatgtatgactatgaggacagaatcaatgca
gctgtttttcctggactgcaaggtggtccacataatcatactataacaggtctagcagtt
gctctgaagcaggtgaaatcaccagagtataaggcttatcaggatcaagttctccgcaat
tgctcaaagtttgctgagactttgctatcaaaaggatatgacttagtatctggaggcact
gacaatcatttagtcttggtgaacttgaaaaataagggaatagatggatcaagagtggaa
aaagtattagaatcagtacatattgcagcaaacaagaacactgttcctggtgatgtttcc
gccatggttccaggcggcatccgtatgggaacaccagctctcacatcaagaggattcatt
gaagaagattttgcaaaagtggctgaatactttgatttagccgtcaagatagccttgaag
atcaaggcagagtctcaaggaacaaagctgaaggactttgtagcaacgatgcaatcaaat
gagaagttacagtcagagatggcaaagcttcgtgagatgattgaagaatacgctaaacag
ttcccaacgattgggttcgagaaagagacaatgcgatacaaagagtag

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