Brassica napus (rape): 106402358
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Entry
106402358 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106402358
04121 Ubiquitin system [BR:
bna04121
]
106402358
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106402358
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106402358
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106402358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_5
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
106402358
NCBI-ProteinID:
XP_013698524
UniProt:
A0A816Q864
LinkDB
All DBs
Position
C6:complement(18697603..18699349)
Genome browser
AA seq
343 aa
AA seq
DB search
MEEAASATSYWCHMCSQTVNAVMMEDEIKCPFCRSGFVEEMDEDHHSSDRRATTTTSSIW
APILMEMMNNSATRNQTAESVENENGNGRDLDSQLQEILRRRGRRSSVSVVQLLHGVRAL
QPESSNRDADDDDNNHPSNGERGRLIVISPHHQIIAVPRSLVTDSMPDGSSLSDYFIGPG
FEALLQRLAENDPNRYGTPPARKEDVESLATVKIQEPSLQCSVCLDDFEVGAEAKQMPCK
HNFHADCLLPWLELHSSCPVCRYQLPTDETKTTDSATYDNNGVNESSSATSSSSQGTENS
DANRHEGEGEEENDDGNRNAFSIPWPFSSLFSSSSSQGRNSSD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctgctagtgcaacgagttattggtgccacatgtgttcccaaactgtgaat
gcggtgatgatggaagacgagatcaaatgccccttttgtcgaagcggctttgttgaagag
atggatgaggatcaccactcttcagatcggagagcaacaacaaccacttcttctatctgg
gctcccatcttgatggaaatgatgaacaactctgccacaaggaaccagactgctgagtct
gttgagaatgaaaacggaaacggtagggacttggattcccagcttcaagaaattcttagg
agaaggggaagacgttcttctgtttccgttgtgcagttgcttcatggtgttcgagcactc
caacctgagagtagtaacagagatgctgatgatgatgataacaaccatccctcaaatgga
gagagagggcgcttgatcgtcatcagtccgcatcatcaaattatagccgtcccacgctct
cttgttacggattctatgcctgatggttcttctctaagcgactatttcatcggtcctgga
ttcgaagcgctgctccagcgtctagcagagaatgatcccaacagatatggaacacctcca
gctcgtaaagaagatgtcgagtctttggctactgtcaaaatccaagagcctagtctgcag
tgttctgtgtgtttggatgattttgaggttggggccgaagctaaacagatgccctgcaag
cacaacttccatgctgactgcttgctcccgtggcttgagcttcacagttcatgccctgtt
tgtcggtatcagttacctacagatgagaccaagactactgattcagcaacatatgacaac
aatggagttaatgagtcttcttctgctacaagcagcagcagccagggaactgagaacagc
gatgcaaaccgtcacgaaggagaaggagaagaagagaacgatgatggtaataggaacgca
ttctcgatcccatggccgtttagcagcttgttctcgtcgtcgtcgtctcaaggcagaaat
tcatcggattga
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