Brassica napus (rape): 106402924
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Entry
106402924 CDS
T04128
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase-like
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
bna
Brassica napus (rape)
Pathway
bna00240
Pyrimidine metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
106402924
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
106402924
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Paralog
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Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
106402924
NCBI-ProteinID:
XP_048637792
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Position
A6:complement(1901485..1904158)
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AA seq
332 aa
AA seq
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MASYSSSSLSRLSTLQNHISPLEANNKLRSLVKISPQVSDAISNGRAVVALESTIISHGM
PYPQNLQTAKEVESIVRENGAVPATIAILNGVPCIGLNEEELERLASLGKSVQKTAGRDI
PHVVATRANGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHTMDISSDLTALGRTPIA
VISAGVKSILDIPKTLEYLETQEVYVAAYKSDEFPAFFTEKSGCKAPSRVDSPEDCARVI
DANMKLNRKAGILFAVPIPKQHSAAGNLIESATQRALTEAREQNVTGNAETPFLLARVNE
LTGGTSLAANIALVKNNALIGSQIAVALSQLV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatattcttcgtcctctctttctagactctcaactctccagaatcatatctcc
cctcttgaagccaacaacaagctaaggagtctggtcaagatatctccacaagtatctgac
gccatatccaatggacgtgctgtggtagctcttgagtcaaccattatctcccatgggatg
ccttaccctcaaaatctgcaaacagcaaaagaggttgagtcaattgtgagagaaaatggt
gcagtccctgcaacaatagctatcttgaacggagtgccttgcataggtctgaacgaagaa
gaactagaacgtcttgcatctcttgggaagagtgttcaaaagactgcaggcagggacata
ccacatgttgtggcaacaagagcaaatggtgcaactacagtctctgcaacgttgtttttc
gcttcaatggttggcatccaagtttttgtaaccggcgggataggaggtgtgcataggcat
gccaaccatactatggacatatcatctgatcttactgcacttggaaggactcctatagca
gtgatatcagcaggcgttaaatcaatactggatattccaaagactcttgaatatttggaa
actcaagaagtgtatgttgctgcatacaagagcgatgagtttccggcatttttcacagag
aaaagcggctgtaaggcaccttcccgagttgatagccctgaagactgtgctcgtgtaata
gatgcaaacatgaagttaaaccgtaaggcagggattctattcgctgttccaatcccaaaa
cagcattcagctgccggaaatcttattgaatcagcaacacagcgtgctcttacagaagca
agggaacaaaacgttactggaaatgcagaaactccattcttacttgcacgggtaaatgag
ttaactggaggcacctcacttgcagcaaatattgcgcttgtgaaaaacaatgcccttatc
ggttctcagattgcagtagcactttctcagctggtgtga
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