Brassica napus (rape): 106404097
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Entry
106404097 CDS
T04128
Name
(RefSeq) coatomer subunit beta'-3-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106404097
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106404097
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106404097
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106404097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
Beta-prop_SPT8
Beta-prop_Nup120_160
WD_LRWD1
TPR_GEMI5
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
106404097
NCBI-ProteinID:
XP_048609069
LinkDB
All DBs
Position
C3:complement(28042771..28049849)
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLDIKKKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYALERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGASYEVTDGERLPLAVKDLGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFNKNFQ
ERKSIRPTFSAEKIFGGSLLAMCSNDFICFYDWAECRLIQRIDVTVKNLYWAESGDLVAI
ASDTSFYILKFNRDLVSSHFASGRQTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKEQHNNVAHFLESRGMIEDALEVATDPDYRFELAIQLGRLQIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGMSKLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEANAVEARGVYAAAENYATRADQPFITLVEAF
RNLQVEAVEPLENGDGDHEVEEENGHVENEGGEEEENEEEEMNQEEGVVDEDSTDGSAVL
VNRSEGEEEWGTNSKDNQSA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactcgatatcaagaaaaaatttgctcaacgatcagagcgagtgaaatct
gtggatctgcatcctacagagccatggattctagcaagtttgtattctggaaccgtgtgt
atctggaactaccagactcagacgataacaaaatccttcgaggtgaccgaattgccagtt
aggtcggccaagtttatcccacgcaagcaatgggttgtggcaggagcggatgatatgtac
atccgtgtatacaactacaacacaatggacaaggttaaagtgtttgaggctcattccgat
tacattaggtgtgttgctgtccatccgacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctctgggactgggaaaatggttgggcctgtactcagatctttgaggga
cattctcactatgtgatgcaagtggtatttaatccaaaagacaccaacacttttgccagt
gcatcgcttgaccgttccataaagatatggaatcttggctccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgcgtagattatttcacagggggtgataagccc
tatttaattactggctctgacgatcatactgctaaggtatgggactatcaaactaaaagt
tgtgtccagacgctagaagggcatacccacaatgtatctgcagtatgtttccatccagag
cttccaataatactcacaggttctgaggatggcactgttcgtatttggcacgccacgact
tacaggctagagaacacattgaattatgctctcgagagagtctgggccattggttacata
aaaagttcgcgtagggttgtgattggatacgatgaaggaaccatcatggtcaaacttgga
cgagaaattcctgtggctagcatggacagtagcggaaaaattatatgggctaagcataat
gaaatccaaactgcaaacatcaaaagtattggtgccagttacgaggttactgatggagaa
agacttcccttggctgttaaagatctggggacctgtgatctttatccacaaagcttgaag
cataacccaaacgggaggtttgtcgtagtctgcggggatggagagtacataatctacaca
gctttggcttggagaaataggtctttcggttctggactggaatttgtttggtcatccgag
ggggaatgtgcagttcgagagagctcgtcaaagataaagatattcaataaaaatttccag
gaaaggaagagtattcggcctactttctcagctgagaagatttttggaggatccttgtta
gcaatgtgttcaaatgatttcatctgcttttatgattgggctgaatgtaggctgattcag
cgaattgatgtcacagtaaagaatctttattgggcagaaagtggtgatttagttgccatt
gctagtgatacgtcgttctacatcctgaagttcaatcgtgacttggtttcctcccatttt
gctagtggaagacaaactgatgaagaaggtgttgaggatgcttttgaggttctccatgag
aatgatgaacgtgttaggacaggtatatgggtcggggactgcttcatttacaacaactct
tcttcgaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgt
ccaatgtatttgttaggctatattgccaaccaaagtcgggtctacttggtagacaaagaa
ttcaatgtcataggatataccctgctgcttagcctgattgaatacaagactcttgtgatg
cggggtgatttggacaaagccaatgaaattttacctacaattcctaaagagcagcataac
aatgttgctcatttcttggagtctcggggaatgattgaagatgctttagaagttgcgaca
gatcctgactacaggtttgagctggccatacaattgggtaggcttcaaattgccaaggaa
atcgctgaagaagtgcagagtgagtctaaatggaagcagttaggagagttagccatgtct
tctgggaagctccaactggccgaggattgcatgaagtacgctatggatttgagtggtttg
ctactactatattcttctttgggagatgctgaagggatgtcaaagcttgcatcccttgct
aaggagcagggaaagaacaatgtcgcctttctttgcttattcatgctgggtaaattggaa
gattgtctgcagttattggtggagagcaatcggataccagaagctgctctgatggcacgt
tcttatcttccaagcaaagtttcagagatagtagctctttggaggaaagatctaagcaag
gttaattcgaaagcagcagagtctttggctgatcctgaagagtacccaaatctttttgag
gattggcaagttgctctttctgttgaagcgaatgctgtagaggcgaggggagtttatgct
gctgcagaaaattatgcaacccgggccgatcaacctttcattaccctcgtggaagccttc
agaaacctgcaagttgaagcagtggaaccacttgaaaatggagacggagatcacgaggta
gaagaagaaaatggtcatgtagagaatgaaggaggtgaagaggaagagaatgaagaagag
gaaatgaatcaagaagagggagttgttgatgaagactctacagatggtagtgctgtactt
gttaatagaagtgagggtgaggaagagtggggtacgaatagtaaagacaaccagtcagcc
taa
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