Brassica napus (rape): 106404480
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Entry
106404480 CDS
T04128
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106404480
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
106404480
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106404480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransf_23
PRMT5
DREV
MTS
Methyltransf_2
PPS_PS
Methyltransf_4
Methyltransf_28
PCMT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
106404480
NCBI-ProteinID:
XP_013700650
UniProt:
A0A078IV81
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Position
C4:complement(447452..448950)
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AA seq
346 aa
AA seq
DB search
MAGGKIRKEKPKAPSNNYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPG
TGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPYSNRLKVIQGDVLKTELPRFDICV
ANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVS
HLLKVGKNNFRPPPKVDSSVVRIEPRKPQPQVNKKEWDGFLRVCFIRKNKTLGAIFRQKS
VVSMLEKNFKTLQAVLASLNGSTGEAAVMDVGDQSMGLEDDDNEMEDDDEDMEMEEGQGG
GGGEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagggaagataaggaaggagaagccaaaggcaccatcaaacaattaccaagga
ggaatctccttccacaaatcgaaaggacagcatatcctcaagaaccctctcctcgtcgac
tcaatcgtccagaaagcagggatcaagagcaccgacgtgatcctcgagatcggtccaggt
actggtaacttgactaagaagcttctagaagctggtaaagaggtcatcgccgtcgaactc
gattctcgtatggttctcgagcttcagcgccgtttccaaggcactccctattctaaccgc
ttgaaggtgatccaaggtgatgtgttgaagacggagcttccacggttcgacatatgtgtg
gctaacattccttatcagatatcatctcctcttacgttcaagcttctcttccacccgacg
agcttcaggtgcgctgtgatcatgtaccagagagagttcgcgatgagactcgttgcccag
cctggagacaacctctactgccgtctctcagtcaacactcagctgtatgctagagtctcc
cacctcctcaaagtggggaaaaacaacttccgaccgcctccgaaggtggattcttctgtc
gttaggatcgagccgaggaagccgcagcctcaggtgaacaagaaggagtgggacgggttc
ttgagggtctgttttatcaggaagaacaagactctgggagcgattttcaggcagaagtct
gttgtttcgatgctggagaagaacttcaagactcttcaggcggtgctagcttcgttgaat
ggctctactggagaagctgctgttatggatgttggtgaccagagcatgggtttggaagat
gatgacaacgagatggaggatgatgatgaggatatggagatggaggaaggacaaggagga
ggaggaggagagtttaaggagaaagtgatgaatgtgttgaaggaaggtgggttcgaggag
aagaggtcttcaaagctatcacaacaagagtttttgtatcttctttccttattcaacaag
tctggtattcacttctcttaa
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