Brassica napus (rape): 106405056
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Entry
106405056 CDS
T04128
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 60
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106405056
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106405056
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GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
End_tail_spike
PIF6
Motif
Other DBs
NCBI-GeneID:
106405056
NCBI-ProteinID:
XP_048598687
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Position
A10:complement(7375249..7380398)
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AA seq
540 aa
AA seq
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MMHKISILSLHLLLVLCLHPLTTTADGNFTTGIDTWCDQTPYPDPCNHYFRRHNGYRLPT
HLSEFRVMLVEAAMDRAISAQDKLKMSGLNCTDCRKQAILTDCIDLYGDTVLQLNRTLQG
LSPKTAGEPCTDVDAQTWLSTALTNTETCRRGSSDLNVSDFTTPIVSNTKISHLISNCLA
VNGALLTTGNNDTTTTDDPKVFPAWVSRKERRLLKLQSAPTVPANVVVAKDGSGRFKTVQ
AAIDLAGRRKVTSGRFVIYVKRGIYQENINVRLNNDNIMLVGDGMRYTIITGGRSVKGGY
TTYSSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYRCAMEGYQDTLMVH
SQRQFYRECYIFGTIDFIFGNAAVVFQNCIILPRRPLHGQSNVITAQGRADPFQNTGISI
QNSIIQPAADLKPVIRSVTTYLGRPWMKYSRTVILKTYLDSFVSPVGWSPWIKGSTYALD
TLFYAEYKNIGPASSTRWRVRWKGFHVLNKASDASAFTVGKFITGTAWLPRTGIPFSSGL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataaaatctctattctatctctacacttactattagtactctgtctccatcct
ctcaccaccacagcggacggtaatttcaccaccggcattgatacatggtgcgatcaaact
ccataccctgatccatgcaatcactacttccgacgccacaacggttatcgcctaccgaca
catctatccgagttcagagtaatgctggtggaagcagccatggatcgggccatatccgct
caagacaagctgaagatgtccggtctgaactgtactgattgccggaaacaagccattttg
acagactgcattgacctatatggagacactgtccttcagctaaacaggacgctgcaaggc
ttgtctccaaaaaccgccggagaaccgtgcaccgacgttgacgctcaaacgtggctgagc
accgcgcttacaaacacagagacatgccgacgcggctcctctgatcttaacgtctcagat
ttcaccacaccaatcgtttcaaacaccaagatctcccacctaataagcaactgcttagcc
gtcaacggagccctcttgaccaccggaaacaacgataccaccaccactgatgatccgaag
gtttttccagcatgggtttcccgtaaagagaggagacttctgaaattgcaatccgcacct
accgtcccagccaacgtcgtggtggccaaggacggatcgggacgttttaagacggttcaa
gcagctattgacctggctggacggagaaaggtgacgtcagggaggtttgtgatatacgtg
aagagagggatatatcaagaaaacataaacgtacgtctcaacaacgataacataatgttg
gtcggcgacggaatgagatacaccattatcaccggaggtcgcagtgtcaaaggaggctac
acaacttacagttctgccactgccggtatcgaggggcttcacttcatagcgaaaggcata
acattccggaacacagcgggtccggctaaaggccaggccgtggcactccgatcatcttca
gacctctcaatcttttacagatgcgcaatggaaggataccaagacacactgatggtccat
tcgcaacgccagttttaccgcgagtgctacatcttcggaaccatcgatttcatctttgga
aatgcagccgtagttttccaaaactgtatcatcctccctcgtcggccactacatggtcaa
tccaatgtaataaccgcacaaggtcgtgctgatccttttcaaaacacaggtatctctatc
caaaactcaataatccaaccagctgccgatctaaaacctgtgatccgtagcgttacgacg
tacttgggccggccttggatgaaatactcgcgcaccgtgattcttaagacgtatttggat
agttttgtgagtccagttgggtggtctccgtggatcaaaggttcgacgtacgctctcgac
acattgttctatgcggaatataagaatattggaccagcttcgtcgacgaggtggcgtgtc
cgttggaaaggttttcatgtgctaaataaagcttccgatgcttctgctttcactgttgga
aaattcatcacaggtactgcatggctcccacgtaccggcatacccttctcttccggactc
taa
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