Brassica napus (rape): 106405079
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Entry
106405079 CDS
T04128
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106405079
03460 Fanconi anemia pathway
106405079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106405079
03400 DNA repair and recombination proteins [BR:
bna03400
]
106405079
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106405079
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Topoisomerases
106405079
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106405079
FA (Fanconi anemia) pathway
106405079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
106405079
NCBI-ProteinID:
XP_013701142
LinkDB
All DBs
Position
C2:56590851..56596802
Genome browser
AA seq
921 aa
AA seq
DB search
MSRRGGGPVTVLNVAEKPSVAKSVAGILSRGSFRTREGRSRYNKIFEFDYAINGQPCRMM
MTSVIGHLMELEFADRFRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARRSDWLVL
WLDCDREGENIAFEVVDVCRAVKQNLYIRRAHFSALIDREIHEAVQNLREPNQLFAQAVD
ARQEIDLRIGASFTRFQTMLLKDRFAIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQ
AHEPEEFWTINCSHESEEGLATFNWMRGHLFDYASAAILYEMCVLEPTATVMNVPHPREK
FKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAM
VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNV
YELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPV
YDKGQQFIPTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATK
DANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGNKTKAEVLETCLQQM
KACFLDARVKKTKLLEAMTIFFERSNNADEGENQTAGEVVRRCNLCHESDMALRKNQDGN
FMVGCMSYPQCRNAVWLPGPTLEASVTTDTCQSCGPGPVYKIRFKFRQIRIPPGFDVNHL
GCVGGCDDVLKQLIDICGTGSRSQARAAPGATPNNVRGSNIRQNNVCIHCQQGGHTSANC
PTRASGYRNPRATGTANPRNNETTVSCTTCGTPCAIRTANTEANRGRKFYSCPSQGCNFF
TWEDSISNGTGNATTGSNSGGSGRRGRGGGRGNRGGGQRGGGRGGGGTSFVSATGEPVSG
RRCFSCGDPSHFANACPNRNS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgaggcggtggtcccgtgacggtactgaatgtggcggagaagccgtcggtg
gcgaagtcagtggccgggattctatcccgtggaagtttccggactcgggaaggtaggtct
cggtacaacaaaatcttcgagttcgattacgcaatcaacggccagccgtgccgtatgatg
atgacctccgtcatcggtcacctgatggagcttgagttcgccgatcgcttccgcaagtgg
cactcctgcgacccggcggatctgtaccaagctccggtcatgaaacacgtccccgaggat
aagaaggatattaagaagacattggaggaggaagcaaggaggagcgattggcttgtgctg
tggcttgattgtgatagggaaggtgagaacattgcgtttgaagttgtggatgtttgtaga
gctgtgaagcagaatctttatatacggagggctcatttctctgcgttaattgacagggaa
attcatgaggcagttcagaatctcagagagcctaatcaactgtttgctcaggctgttgat
gctagacaagagatagacctacgcattggagcttctttcactaggtttcagactatgctt
ctgaaagataggttcgctattgactccacgggtgatgaagagaggagtcgtgtaataagt
tatggtccttgtcagtttcctacacttggctttattgtagagagatactgggagatacag
gcgcatgaaccagaagagttttggacaatcaactgttctcacgaatcagaagaaggcctt
gccacctttaattggatgcgtggtcatctctttgattatgcttcagctgcgatattatat
gagatgtgtgtcctggaacctactgccaccgttatgaatgtcccgcatccaagggaaaaa
ttcaaatatcctccttatccattgaacacaattgaacttgaaaaacgcgcttcaagatac
ttccgcctgagttcggagcataccatgaaggtggcagaagagttatatcaggctggtttc
atcagctatcctcgtacagagacagattctttttcaagcaggactgatttacgtgccatg
gtggaggaacaaacaagacatcctgcatggggtccatatgcacaaagactattagagccg
gaggggggactctggagaaacccggggaatggtggtcatgatgacaaggctcacccaccc
attcacccaacaaagttttctagcggagagtctaactggagtagagatcaccttaacgtt
tatgagcttgttgtccgccattacctggcgtgtgtttcccagccagcagttgctgctgaa
actacagtagaaattgatattgctggtgagcgtttttctgcatctgggagagcaatatta
gctaaaaattaccttgaggtgtaccgctttgaatcttggggaggttcagtgattccagta
tatgataaagggcagcagtttatcccaacacgtttgactctggattcagcggtaacaagg
ccaccaccgctattgtgtgaagctgacttactgagttgtatggacaaggcaggcattggc
actgatgcgacaatgcacgaccatataaagaaactccttgatcggggttatgctacaaag
gatgctaatacgcgcttttctccaaccaacctgggtgaggcgcttgttatgggatatgat
gacatggggtatgaactttggaaaccaaacctcagagccatcatggaacatgatatgaat
gaagttagtgttggcaacaagactaaagctgaagttcttgaaacttgtttgcagcaaatg
aaagcttgtttcttagatgcaagagtcaaaaaaacaaagctcctagaagcaatgacaatt
ttctttgaaagatctaataacgccgatgaaggtgaaaatcagacagctggtgaagttgtc
cgacgatgcaacctttgccatgaatcagatatggcgctcaggaagaaccaggatggcaat
tttatggttggatgcatgagctatcctcagtgtcggaatgcagtttggcttcccggacct
acattggaagcatctgtcactactgacacttgtcaatcttgtggtccaggtcctgtctac
aagatacgtttcaagttccgtcagatcagaattccaccaggctttgatgttaatcactta
ggctgtgttggtggctgtgatgacgttcttaaacagctgatagacatatgtggaactgga
tcccgttctcaagcaagggcagccccgggtgcaaccccaaacaatgtccgaggaagcaac
ataagacagaacaacgtgtgcatacactgtcaacaaggagggcatacttctgccaattgt
cccacgcgagcttcaggatatcgaaatcctcgtgctactggaacagcaaatccgagaaac
aatgaaactacagtttcatgtaccacttgtggaacaccatgtgctattcgtacagccaac
acagaagctaacaggggaaggaagttctactcatgtccatcacaaggctgcaacttcttc
acatgggaagatagcatcagcaacggtactgggaatgcaacaacaggttctaatagcggc
ggaagcggtaggcgcggccgtggtggtggccggggaaatagaggcggtggccaaagaggt
ggagggcgtggcggcggtggaacaagctttgtttctgcaactggagagccagtgagtggt
agaaggtgcttctcatgtggtgatccttcacattttgccaacgcttgccctaaccgtaac
tcttaa
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