Brassica napus (rape): 106405200
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Entry
106405200 CDS
T04128
Name
(RefSeq) putative RING-H2 finger protein ATL12
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106405200
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106405200
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106405200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H
Adeno_E3_CR2
Tmpp129
Prok-RING_1
Prok-RING_4
zf-DNL
zf-Nse
zf-RING_4
FANCL_C
Zn_ribbon_IFT122_C
RINGv
Motif
Other DBs
NCBI-GeneID:
106405200
NCBI-ProteinID:
XP_013701238
UniProt:
A0A816UXP8
LinkDB
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Position
C8:complement(44158751..44161919)
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AA seq
404 aa
AA seq
DB search
MNPPKAISTLFFSIFFFLDYVSAQSPPPPPFLYAANGLFQPSLAIITGVFSIVFTLTFVL
LIYAKCFHNDLRSETYEDGEIRRLDRLWQGLFSQSSRLSGLDKTAIESLPFFRFSALKGS
KQGLECSVCLSKFEDVEILRLLPKCKHAFHIECIDEWLEQHATCPLCRNRVSIEDELSVF
GGGSNNSMRIMSQLSESREEESSMEVYVEREEGIRDGSSRYSSFRKILNFGKNDNSLSLV
EQGNEKCLHKFNHRIVVSDAVFKNRWSNVTPADLTFLTSNMLSSTSSDRFSSIDRVQRGD
LRDKEEIDMKKMVDNKDSTRRSVSEITAVPRLSVVTTAARENAVGGSNSGLDASTASTSR
SDVIAAMEERRRRMWLPIARKTAQWFVNREKKNELKTTGQDLNV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaccaaaagcaatctccacgctcttcttctccatcttcttcttcttagattat
gtctctgctcaatctcctcctcctcctccttttctgtacgcagccaacggcctctttcag
ccaagtttagccatcatcacgggagtgttctccatcgtcttcacactcaccttcgttctc
ctcatctacgccaaatgcttccacaacgatctcagatcggagacctacgaagacggagag
atacgacgactagatcgtctatggcaaggactcttcagccaatcttctcgattatcaggt
ctcgacaaaacagcaatcgagtctcttccctttttcagattctctgctttgaaaggatcg
aaacaaggtctcgaatgttctgtttgtttgtctaaattcgaagatgttgagatacttagg
cttctgcctaaatgcaaacacgcttttcatattgagtgtattgatgagtggcttgagcag
cacgctacgtgtcctttgtgtagaaacagagtctccattgaggacgagctctctgttttt
ggtggtggtagtaacaatagtatgagaatcatgagtcagttatctgagtctagagaggaa
gaatcgagcatggaggtttacgtcgaacgcgaagaaggaatcagagacgggtcttcgaga
tacagcagcttccggaagatactcaactttggtaaaaacgataactcgttgtcgcttgtg
gaacaaggtaacgagaaatgtctgcacaagttcaatcacaggattgttgtttcagatgct
gtgtttaagaaccgttggagtaatgtgactccagctgatttgacctttttgacatcgaac
atgttgagttcgacgtcaagcgacagattctcgtccattgatcgagtgcagagaggtgac
ttgcgtgacaaggaagagattgatatgaagaaaatggttgataacaaagattctactaga
agatcggtttctgagatcacggctgttcctagactcagcgttgttactacagcggctaga
gaaaacgcggttggtggaagcaacagcggtttggacgcttctacagcttccacatcgaga
agtgatgtgattgctgcgatggaggaaagaagacgaaggatgtggttgccgattgctaga
aaaacagcacagtggtttgttaacagagagaaaaagaatgaactaaaaacgacaggacaa
gatcttaacgtttag
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integrated database retrieval system
