Brassica napus (rape): 106405541
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Entry
106405541 CDS
T04128
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106405541
Membrane trafficking [BR:
bna04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
106405541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
V-SNARE
NPV_P10
Prominin
Occludin_ELL
DUF948
MCPsignal
JAKMIP_CC3
Laminin_II
DUF7605
DUF713
Syntaxin_2
LRS4
ANIS5_cation-bd
TMPIT
Vps53_N
DUF3450
Endotoxin_N
Zw10_N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
106405541
NCBI-ProteinID:
XP_013701516
UniProt:
A0A078D634
LinkDB
All DBs
Position
C3:11077110..11079465
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AA seq
262 aa
AA seq
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MDVSAVSEELAELEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKD
FDREVKSLESGNDANTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPAE
DHMEENVLLASNMSNQELMNKGNSMMDDTDQAIERGKKIVLETINVGTDTSAALKAQTDQ
MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK
DIRDIPGLAPPAMNRRLLWNHY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcggcggttagcgaagagctggctgagctcgaaggacaaatcaatgacatc
ttccgtgctttgtcaaacggattccagaagctggagaagatcaaagatgctaataggcag
agtaggcagctcgaagagctcactgacaaaatgcgtgactgcaagagccttattaaagat
tttgatagggaagtcaaaagcttggaaagtggaaatgatgccaacactaaccggatgctc
aacgacagacgacagtccatggttaaggaattaaactcatatgttgctctcaagaagaaa
tactcatccaatctagcaagcaataataagcgagtagatcttttcgatggacctgccgaa
gaccacatggaagagaatgtcttacttgcttcaaacatgtccaatcaagaactaatgaat
aaaggaaactccatgatggatgatactgatcaagccattgaaaggggcaaaaagattgtt
ctggagactataaatgtgggaacagatacttcagcagctctcaaggctcagaccgatcaa
atgagtagagttgtcaatgaactcgattctatccatttctcactcaagaaagcctccaag
ctggtcaaggaaattggtaggcaggtggccacagacaaatgtattatggcatttcttttc
cttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaacaaa
gacatccgtgacatacctggcctagctccaccagccatgaatagacgtttactctggaac
cattactga
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