KEGG   Brassica napus (rape): 106405638
Entry
106405638         CDS       T04128                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bna01002]
    106405638
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:bna03110]
    106405638
Peptidases and inhibitors [BR:bna01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   106405638
Chaperones and folding catalysts [BR:bna03110]
 Other chaperones and cochaperones
  AAA proteases
   106405638
SSDB
Motif
Pfam: AAA Peptidase_M41 AAA_lid_3 DUF5906 TIP49 AAA_16 RuvB_N AAA_5 ATPase AAA_22 AAA_28 nSTAND3 AAA_17 AAA_18 AAA_14 AAA_33 RNA_helicase Sigma54_activ_2 AAA_lid_PRS2_C TsaE Mg_chelatase
Other DBs
NCBI-GeneID: 106405638
NCBI-ProteinID: XP_013701610
LinkDB
Position
C6:complement(31180849..31186061)
AA seq 1008 aa
MEIAIPYKPNPLISSPTNLLKRPKSFGLVRFPAKYGHRVTRKNPIFRVYASESSNGSSSN
NGGGFSWVRLTQSLRVGVERIGEKIGKSVKKETGFDPEEAGARVDEYVGRVKDIVKKGQG
ELTRFRTEIVPSFIDWNKWEHWKDIKYWDGRRVAALMIYAFALLFSCQRVYVAVQAPRIE
RERRELTESFMEALIPEPSPDNIDKFKRNMWRKTTPKGLKLKRFIEAPDGTLVHDSSYVG
ENAWDDDLETTEGSLKKIIDRNARIQTEAKKKLSRDLGVSGEVGGSVGTWQERLATWKEM
LEREKLSEQLNSSRAKYVVEFDMEEVEKSLCKDVVEKTSETEGTRALWISKRWWRYRPKL
PYTYFLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETISNSGVEVD
LLQKRQIHYFMKVFIALLPGILILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFIL
PVGDVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVPFVRGVLLSGPPGTGKT
LFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRH
ARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDR
RLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRK
GRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLF
PRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD
DFTDGGKDDLEKITKIAREMVISPQNTKLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPH
VMPADMSIEVSELFTRELTRYIEETEELAMNALRANRHILDLITGELLERSRITGLEVEE
KMKSLSPLMFEDFVKPFQINADEEEPLPPKDRVSYQPIDLRPAPLHRC
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggagattgcgattccgtataaaccgaaccctcttatctcttcgccgacgaacttgctc
aaaagacctaaaagtttcggtcttgttcggtttcccgcaaagtatggacaccgagttacg
aggaaaaatccaatctttcgcgtctacgcgtctgaaagtagtaatgggtcttcgtctaat
aacggtggagggttctcgtgggtgaggttgacgcagtctctccgtgttggcgtggagcgg
atcggggagaagattggaaagtctgtgaagaaggaaactgggtttgacccggaagaagca
ggtgcgagagttgatgagtatgtgggtcgagttaaggatatcgtgaagaagggccagggc
gagttgactcgctttaggactgagatagtgccttcgtttattgattggaacaagtgggaa
cactggaaggacatcaagtattgggacggtagacgagttgctgcactgatgatatatgct
tttgcgctgttattttcttgtcaacgagtttatgttgccgtccaagctccccggatagaa
cgagaaagaagagagttaactgagtcttttatggaggctttgatccccgagccatctcct
gacaatatagataagtttaagagaaatatgtggaggaagacaacacctaaaggcttgaaa
ctaaaaaggttcattgaagcgcctgatggaacacttgtccacgatagttcctatgttgga
gaaaacgcatgggatgatgatctggagacaacagaggggtctctcaaaaaaatcattgac
agaaatgcgaggattcagacagaggcaaagaagaaactaagccgtgatttgggtgtctct
ggtgaagttggaggcagtgtaggtacatggcaggaaaggcttgcaacctggaaggagatg
ttggaaagggaaaagttatcagagcagttaaactcctcaagggccaagtatgttgttgaa
tttgatatggaagaggttgagaaaagtctttgcaaagatgttgttgaaaagacctctgaa
actgagggaactagagctctctggatatcaaagagatggtggcgttatcgccctaagctt
ccttatacctattttctccagaagcttgattcttccgaggttgcagctgttgtcttcacg
gaagatctaaagagattgtatgtgacgatgaaagaaggtttccctctagaatatattgtt
gacattccattagatccatacttgtttgagactatttctaactctggagttgaggtggat
ctccttcagaaaaggcagatccactacttcatgaaagtgttcattgcacttctgcctggg
atactaattctatggtttataagagaatctgccatgcttctcctcatcacatcaaagcgg
tttctatacaagaagtataatcagctgtttgatatggcttatgcggaaaattttatactg
ccggttggagatgtcagtgagacaaaatcaatgtataaggaagtggtgctaggcggtgat
gtttgggatcttcttgatgagctaatgatctacatggggaacccaatgcaatactatgag
aaagacgtgccttttgtcaggggtgtgcttctttctggacctcctgggacagggaaaaca
ctttttgcgcgaacactggcaaaggaaagtggactgccatttgtatttgcgtctggtgcg
gagttcacagatagtgaaaaaagtggtgctgcaaagatcaatgagatgttttcagtggcg
agacgaaatgcacctgcttttgtgtttgtggatgaaattgatgccattgctggtaggcat
gctaggaaagatccacgaagacgagcaacttttgaagctttaattgcacagctcgatgga
gagaaggaaaagacaggcattgataggttttctctgagacaagctgtgatatttatctgc
gctaccaatagacctgatgaactcgaccttgagtttgtccgctctggacgtattgaccgt
cggctgtatattggtttgcctgatgcaaagcaaagggtgcaaatatttggagttcacagc
gccgggaagaaccttgctgaagatatagactttgggaagcttgttttccggacagttgga
ttctctggggcagatatccggaatcttgttaatgaagctgctataatgtcggtaaggaag
ggacgttcgtatatatatcagcaagacattgttgatgtgctagataaacaattactcgag
ggtatgggcgtacttctcacagaggaagagcaacagaaatgtgaacaaagtgtatcttat
gaaaagaagagactcctggctgttcatgaggctggtcatatagtattggctcatttgttt
cctcggtttgactggcatgcattttcgcagctccttcctggtggcaaggaaactgctgtt
tcagtgttctatccacgggaagacatggtggaccaaggttatacgacatttggttatatg
aagatgcaaatggtggtagctcatggtggacgctgtgctgaacgtgtggtttttggagat
gatttcactgatggaggaaaagatgacttggagaagataacaaaaattgccagggaaatg
gtgattagcccccaaaatacaaaattgggtctcactcaactggtaaaaaagattggaatg
gtggatttaccagataatccagacggcgagctgattaaatacagatgggaccatcctcat
gtaatgccggcagatatgtctattgaagtatccgagctattcactcgcgagttgacaagg
tatattgaggaaactgaagaacttgcgatgaatgctctgagagcaaacagacacattctg
gatttgatcacaggagagttgctggaacgatcaaggataactggattggaagttgaagag
aagatgaagagtctttctcctttaatgtttgaggattttgtgaaaccattccagataaac
gcagacgaagaggaacctttgcctcccaaggatcgggtgagctatcagccaattgattta
cgtcctgcaccactccacagatgctag

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