Brassica napus (rape): 106405828
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Entry
106405828 CDS
T04128
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
bna
Brassica napus (rape)
Pathway
bna00730
Thiamine metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
106405828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106405828
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
106405828
Ribosome biogenesis [BR:
bna03009
]
Prokaryotic type
GTPases
106405828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
nSTAND1
AAA_29
AAA_21
AAA_16
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106405828
NCBI-ProteinID:
XP_013701830
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All DBs
Position
C6:complement(40199792..40202025)
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AA seq
496 aa
AA seq
DB search
MQISSLSIIRHSSPFLLRRASIHHGGCGVRLGTGIGIRRSFHLLTLSARRDNPDVSRKPQ
PSKNMLRAKHIGKHHSSLAPVLSPDHNPSLLPSQAIGTVATAQANFMRVVVQDGDGDGDD
RSSSTSSSKDGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIENVFQRRSEIL
DPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKCELITEEELESWKM
RLRGWNYEPFFCSVGTKEGLDAIAFVLRNQTSVIVGPSGVGKSSLINILRSSSGGGDVED
ENWFEPIIGNKWFEDQRVGEVSTRSGRGKHTTRNVSLLPITEGGYLADTPGFNQPSLLKV
TKHSLALCFPEIRKMIEEEKCGFKDCLHIGEPGCVVKGGWERYPYYLQLLDEIRVREEFQ
LRTFGTKREGDVRYKVGGMGVKQAEPRLQPKKHRRESRKKVKQTMISELDEYEDEESDLD
IEDDPIVQAIENEKER
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatcgtctctctccatcatccgccactcttctcctttcctcctccgtcgcgcg
tcgattcaccacggcgggtgcggagttcgactcggaaccggaatcggaattcgccgcagc
ttccatctcctcacactctcagcgagacgagacaaccccgatgtctccagaaaaccccag
ccgagcaaaaacatgctcagagccaagcacatcggcaaacaccactcctccttagctccc
gttctctctcccgaccacaatccttcgctcttaccctctcaggccatcggcaccgtcgcc
accgcccaggccaacttcatgcgcgtcgtcgtccaggacggagacggagatggagacgat
cgttcttcttctacgtcgtcgtctaaggacggagttgagctgctctgcgtggtgagagca
gtgctgaagaagataaggaggagagtgctggttggggataaggttctcgttgggtctatc
gattgggttgatcggagagggatgattgagaatgtgttccagcggaggtccgagattctt
gatcctccggtggcgaatgttgatcacttgcttgttcttttctcgcttgatcagcccaag
cttgagccgttcacgctcactaggttcttagtggaagctgagtccactgggattccactc
acacttgccttgaacaaatgcgaactcatcaccgaagaggaattggaatcttggaagatg
agactgcgtggatggaactatgaaccgttcttttgcagtgtgggaactaaagaggggctt
gatgcgattgcgttcgtcctgaggaatcagacttctgtgattgttggacctagtggtgtt
gggaagtcgagtttaatcaacatattgaggagcagctctggtggtggtgacgttgaagac
gagaattggtttgagcctataataggtaataagtggtttgaagatcagcgagttggtgaa
gtttcaactagaagtggtagaggcaaacacacaactcgaaatgtgtcgctgctgccgatt
actgaaggtggttatctcgctgatactcctggttttaaccagcctagtttgctgaaagta
accaagcattcacttgccttgtgtttccctgagataaggaaaatgatagaggaagagaaa
tgtggattcaaagattgcttgcatatcggagaaccaggatgtgtagtgaaaggaggatgg
gaaaggtatccttactacttacaactgcttgatgagatcagagtcagggaggagtttcaa
ctcaggacttttggaaccaaaagggaaggcgatgttaggtacaaagtgggagggatgggt
gtgaaacaagctgaaccaaggctacagccgaagaagcataggagagagtcgaggaagaag
gttaaacaaacaatgattagtgagctagacgagtacgaagatgaagagagcgacttggac
atagaggacgacccaattgtccaagccattgagaacgagaaagaaagatga
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