Brassica napus (rape): 106405912
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Entry
106405912 CDS
T04128
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106405912
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Other 90S particles
106405912
Pre-60S particles
Other pre-60S particles
106405912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Mo25
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
106405912
NCBI-ProteinID:
XP_013701924
UniProt:
A0A816I719
LinkDB
All DBs
Position
C3:10857810..10864531
Genome browser
AA seq
1278 aa
AA seq
DB search
MEPLCLDVETNMYLPHSEPDLPVSQDFGEFMLSRLSQSKRPDHKHLSAVIEELSKTLAEG
NHSQTPVAYFAATCSSLDSLLSSDSEPSLDVVQPHVVILSLVFPKVSAGVLKRNGLALRL
VLSVLRLRSATPECLVSALKCLVHLLTTVESMSGNEVSESYSILLNFVTHSDGKVRKLAS
SCLRDVLVKSSGTKAWQSLSGTIAELFQKYLDLAHKSEARSAEGAQQVLYILSALKECLA
LMSKKHIATVIDGFKILLITRDAFIARPVIDSLNALCLNTASEVPVEALVEVLYHAAVLF
SAPETSADAMTSTARLLKVGMMRAFNLNRDICVVKLPGVFNGLKDIIASEHEEAIFAATD
ALKSLINSCIDESLIRESVNGIRNSNLEARKSSPTVIEKLCATVESLLDYKYHAVWDMAF
QVVSTMFDKLGEDASYFMRKTLEDLSDMKDLPDEDFPYTKQLHECVGSALGAMGPETFLN
IVRLNLEASDLSEVNVWLFPILKQYTVGGRLSFFTEYISRMIETMSQKAQQLKLQGLTSA
SRSVDSLVYSLWAMLPSFCNYPVDTAESFADLGRILCGALQSQAETRGIICASLNILIQQ
NKEVVEGKEMPVSDASPAMVRASGRYNSDIAAANLKVLRSCAPKLLDVLSRIFHESSKDD
GGSVQSAIGNLASIAEKKTVSKLLFKTLRELLEATKTAIAQDESSASGMDVDNIADKNSS
SNLRARLFDLLVSLLPGLDGQEVDTVFSSLKPAMQDPKGKIQKKAYKVLSVILKSSDGFV
SKHLEELLELMHNICHVSAKRHKLDCLYFLLAHASKTDDLKARKDIVSSFLPEVILALKE
VNKKTRSRAYDVLVQIGHAYADEENGGDNEKLHGYFNLVVGCLAGEKPQMISAAVKGVAR
LTYEFSDLIASAYNLLPSTFLLLQRRNKEITKANLGLLKVLVAKSPVEGLHANLKSMVEG
LLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVKSVMPEEHMKLLTNIRKVKERKEKKYAA
ASEMSRSQHSKETSSKVSRWNDTKIFSDFDDEDEDSDGDYMDGETHGRSKASSLLKSKAS
ALRSKKSQRQSHLEVNESDDEPLDLMDRYKTRSALRSSELRKKRKADSDEEAEFDEEGRL
IIQEGGKGKRKEISDPDSDAKSSKGSRFSANTSKKNQKRMKTSESGYAYTGKEYASKKAS
GDLKRKDKLEPYAYWPLDRKMMSRRPDQRAVAVRGMSSVVKLTKRLEGKSSAEALAATKF
QKFKRSGHKKSAGKKKSK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggagccattgtgtcttgacgttgaaaccaacatgtacctcccacactcagaaccagac
ctgcctgtttctcaagactttggggagttcatgctctctcgcttatctcagtcaaaacga
ccagaccataaacatctatccgctgtaatcgaggagctgtcaaagactctagcggaaggt
aaccacagtcaaacacctgtggcttacttcgccgccacgtgtagctccctagacagcctc
ttgtcttcagattctgagccatctctggatgtcgtccagccacacgttgtcatcctctcc
cttgtgttccctaaagtctcagccggagtgctgaagaggaacggtttggctttgcgtctc
gtcctcagcgttctgcgtctgagatcagcaactcctgagtgcttggtctcggcgttgaag
tgtttggttcatctcctcactaccgttgagtcaatgtcagggaacgaagtctctgagtcc
tacagcattttgctgaacttcgttactcattcagatggaaaggtgagaaagctagcgagc
tcctgtctccgtgatgtcctggtgaagtcctctggtacaaaggcatggcaatcactcagt
ggcaccattgcagaactgttccaaaaatatttagacctcgctcataaatctgaagcgcgt
tctgctgaaggagctcagcaagtgctctacattctcagcgctctaaaagagtgcttggcc
ttgatgtccaaaaagcatattgctactgtgattgatgggtttaagatactgctgattacg
cgcgatgcgtttattgcaaggccggtgatagactctttgaatgcgctttgtctcaacaca
gcctctgaggttcctgttgaggcgctggtggaagtgttgtatcatgctgctgttctgttc
tcggcgcctgaaacatctgctgatgctatgacctccacagcacgtttgctgaaagttggg
atgatgagggcttttaaccttaatagagatatttgcgtggttaagcttcctggtgtgttc
aatggtctgaaagatattattgcatctgaacacgaggaggcaatctttgcagcaacagat
gcgttgaagagtttgataaactcgtgcatcgatgagagtttgatcagagaaagcgtcaac
gggatccggaattcaaacttggaggcaaggaagtctagtccaacagtcattgaaaaactg
tgtgcaacagttgaaagcttgcttgattacaagtaccatgcagtctgggacatggctttt
caagtagtttcgaccatgttcgataaattaggcgaagatgcttcatactttatgaggaag
accctggaggacttatcagatatgaaagatttacctgatgaagactttccttatacgaag
cagttgcatgagtgtgtaggatcagcccttggtgctatgggacctgaaacatttttaaac
attgtgcgtttaaaccttgaggcgagtgatctgtctgaggtaaacgtttggctcttccca
atcctgaagcagtatactgtgggaggacggctaagtttcttcacagagtacatctctaga
atgatcgaaacaatgagccagaaagctcaacagctcaagctacaaggtcttacttcagct
tctaggagtgtggactctcttgtatattcattatgggctatgttaccttcattttgcaac
tatcctgtggatacagcggagagttttgcggatctggggcgaatactgtgtggagctctt
caatcacaggctgaaactcgtggaattatatgcgccagtttgaatatcctaattcaacaa
aataaggaagttgtggagggtaaagaaatgcctgtcagtgatgcaagtcctgctatggta
cgagctagtggtcgttataattcagacattgcggcagctaatttgaaagttctgcggtcg
tgtgctcctaagttattggatgttttatcaaggatatttcatgaatctagcaaagatgat
ggcggttctgttcagtctgcgatagggaacttggcgtccattgcggagaaaaagactgtt
tcaaagctactcttcaagacactgcgagagcttttagaggctactaaaactgctattgca
caagatgaaagctctgctagtgggatggacgtggataatatcgcagacaaaaattcttct
tccaaccttagggcaaggttgtttgatctgctagtttctcttttacctggtttggatggt
caagaagtagatactgtattcagttctctgaagcctgcaatgcaggatcccaagggcaaa
attcaaaagaaagcgtacaaagttctttcagttatcttgaagagttctgatggatttgtt
tcaaaacatctcgaggagttgcttgagctgatgcacaatatatgccacgtctctgccaag
cgccataaacttgattgtttgtacttcctgttggctcatgcatcaaagactgatgatttg
aaggcgagaaaggacattgtttcttcatttctacccgaagttatacttgctttaaaagag
gtgaataaaaaaacaagaagcagagcctatgacgtacttgttcagattgggcatgcatat
gcagacgaggaaaacggtggagacaatgagaaactacatggttacttcaatttggtggtt
ggttgcttggctggagaaaaacctcagatgattagtgctgctgttaagggagtagctcgt
ttgacatatgagttctctgatctcattgctagtgcttacaatttgcttccttcaacattt
cttctcctccaaagaagaaataaggaaatcacaaaagcaaatttaggtttgttgaaggtg
ttggtggctaagtcacccgttgaaggactacacgcaaacttaaagagcatggtcgaaggc
ttgctgaaatggcctgaaggaaccaaaaaccttttcaaagcgaaggtgaggcttctattg
gagatgctaatcaagaaatgtggcacggaggctgttaagtctgtgatgcctgaagaacat
atgaagctcctgacaaacatccgaaaggtcaaggagcgtaaagagaaaaaatatgcagct
gcctctgagatgagtagatcacagcattcaaaagaaacttcatcaaaggtcagccggtgg
aatgataccaagatattttctgattttgatgatgaagacgaggacagcgatggagactac
atggatggggagacgcatggccgtagcaaggcttcctctttgttgaaatctaaagcatct
gctttgagatcaaagaagagtcagaggcagagtcatcttgaagttaacgagtcagatgat
gaaccacttgacttaatggatcgatacaaaacaagatcagctcttcgatcaagtgagctt
cgcaaaaaacggaaagctgactcagacgaagaagcagagtttgatgaggaaggacggcta
atcatccaagaaggagggaaaggtaaaagaaaggaaatctccgatccagattctgatgcc
aagagcagcaaaggtagccgtttctctgcaaacacatccaagaagaaccagaagcggatg
aagacatcagagtcagggtacgcttacacaggcaaagagtacgcaagcaaaaaggcaagt
ggagatcttaagaggaaagataagcttgaaccgtatgcgtattggccacttgatcgcaag
atgatgagccgtagaccggatcagcgtgcggttgcggtcagaggtatgtctagcgtggtt
aagctgacaaagaggttggaaggcaagagcagtgcggaagcacttgctgccactaagttc
caaaaattcaagaggagtggtcataagaaatcggctgggaagaagaaaagcaagtga
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