Brassica napus (rape): 106406144
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Entry
106406144 CDS
T04128
Name
(RefSeq) neutral ceramidase 2
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106406144
Enzymes [BR:
bna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
106406144
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
GEVED
Motif
Other DBs
NCBI-GeneID:
106406144
NCBI-ProteinID:
XP_013702200
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Position
C4:59054602..59058365
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AA seq
753 aa
AA seq
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MAVSVPFHFLFFLLLLDRAVYSSSEYLIGVGSYDITGPAADVNMMGYANSDQTASGIHFR
LRARAFIVAEPQGKRVAFVNLDACMASQIVTIKVLERLKARYGDLYTEKNVAISGIHTHA
GPGGYLQYVTYIVTSLGFVRQSFDVLVDGIEQTIIQAHQSLRPGSVYVNKGDLLDAGVNR
SPSSYLNNPEAERSRYKYNVDKEMTLLKFVDSQLGPIGSFNWFATHGTSMSRTNSLISGD
NKGAAARFMEDWFENGQKVSDSSSKITRRVSTIVSDLNTNHSRLLDIAAFYKSSKGQSLD
AKIRVRKASKRAFVSAFCQSNCGDVSPNTLGAFCIDTGLPCDFNHSTCNGKNELCYGRGP
GYPDEFESTRIIGEKQFKMAVGLFNKATEKLQGKVGYQHAYVDFSNLQVTVPRAGGGSET
VKTCPAAMGFGFAAGTTDGPGAFDFKQGDDKGNAFWRLVRNVLKTPGPEQVQCQKPKPIL
LDTGEMKTPYDWAPSILPVQMLRIGQLVILSVPGEFTTMAGRRLRDAVKSFLISLDSKEF
GNNLHVVIAGLTNTYSQYITTYEEYEVQRYEGASTLYGPHTLTAYIQEFKKLATALVNGQ
TLPSGPQPPDLLDKQISLLAPVVVDSTPLGVSFGDVKADVPPKSTFRRGQQVNATFWSGC
PRNDLLTEGSFAVVEMLRDGGKWVPVYDDDDFSVKFKWSRQVKLSPESQATVEWRIPESA
VAGVYRLRHYGASKSLFGAITSFSGSSSAFVVV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcagtgccatttcattttctattctttctccttcttctagacagagctgtt
tactcgtcttcagagtatttaatcggtgtcggaagctatgacatcaccggccccgccgct
gacgtcaacatgatgggctacgcgaactccgatcaaaccgcctcggggattcacttccgt
ctccgcgctcgtgccttcatcgtcgctgagcctcaagggaaacgcgtcgcgtttgtgaat
ctcgacgcgtgtatggcgtctcagatcgtgaccatcaaagtactcgagcgactcaaggca
agatatggtgatctttacacagagaagaacgttgccataagtgggattcacactcacgct
ggaccaggtggttatcttcagtatgttacttacattgtcacctctcttggattcgttcgt
cagtcttttgacgttctcgttgacggcattgagcaaaccatcatccaagctcaccagagt
ctacgtcctggttctgtctatgtcaacaaaggtgatcttttggatgctggtgtgaacaga
agtcctagctcttatctcaacaaccctgaagctgagaggagtagatataagtacaacgtt
gacaaagagatgacgttactcaagtttgttgattcacagttgggacctattggtagcttt
aactggtttgcaactcatgggacttccatgagcaggactaactctttgataagcggtgat
aacaaaggcgcggcagcacgtttcatggaggactggtttgagaatggtcagaaggtttca
gatagttcaagtaaaatcactcggcgtgtatctaccattgtttctgatctgaacacaaac
cacagcagacttttggacattgcagctttttataagtcatctaaaggacagtctcttgat
gctaagatacgagtaaggaaggcttcaaagcgtgcattcgtctccgccttctgtcagtca
aactgtggtgatgtgagtccaaacactctcggcgcgttttgcatagacactggtctgcct
tgtgatttcaatcacagcacctgcaatggaaagaacgagctgtgctatggacgtggaccc
gggtaccctgatgagtttgagagtacacgaatcattggagaaaagcaattcaaaatggcg
gtgggactattcaacaaagctacagagaagctgcaagggaaagttggttaccaacatgct
tatgtagatttctcgaatcttcaagtcactgttcctagagcaggtggtggttctgagacg
gtgaagacatgtccagctgcaatggggtttggttttgctgctggaacaactgatggtcct
ggtgcttttgatttcaaacaaggagatgataagggtaatgccttttggagattagtgagg
aacgtgttaaaaactcctggtccggaacaggttcagtgtcagaaaccaaaacctatttta
cttgacactggtgagatgaagacaccatatgactgggcgccttcgattctaccggttcag
atgcttcgcattggtcaactagtcatccttagtgtccctggagagttcacaacaatggct
ggaaggcgtcttcgtgacgctgtgaagtcatttctcatctctctggacagcaaggagttt
ggcaacaacctccatgtcgtaatcgctggcctcaccaacacgtattctcagtacattact
acttacgaagagtacgaggttcaaagatacgagggagcttcaacgctatacggccctcac
acactcactgcttacatccaagagttcaagaaactagccacagctttggtcaacggtcaa
acactcccgagtgggccccaaccacccgaccttctagacaaacagatcagcttactagcc
cctgtggtcgtggactctactcctttaggagtcagctttggtgacgttaaagcagacgtg
cctcccaagtcaacgttcaggagaggtcaacaagtcaacgcgacgttttggtcaggatgt
ccacgtaacgacctgttgacggagggatctttcgctgtggtggagatgctgcgtgacgga
gggaagtgggtcccagtgtatgacgatgatgactttagtgtgaagtttaagtggtcgagg
caggtgaagcttagccctgagagtcaagccacggtggagtggaggataccagagtcggcg
gtggctggagtttacagattaagacattatggagcttcgaagtcgctgtttggtgccatc
acaagcttctctggttcttctagcgcctttgtagttgtatga
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