Brassica napus (rape): 106406192
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Entry
106406192 CDS
T04128
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106406192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106406192
Membrane trafficking [BR:
bna04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106406192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
NPHP3_N
AAA_5
AAA_22
nSTAND3
RuvB_N
NACHT
AAA_19
Bac_DnaA
ATPase_2
Mg_chelatase
IstB_IS21
RNA_helicase
ATPase
AAA_14
AAA_7
AAA_2
AAA_24
AAA_18
AAA_11
AAA_30
DEAD
NB-ARC
KAP_NTPase
ResIII
ORC-CDC6-like
ABC_tran
KTI12
Zeta_toxin
Sigma54_activat
Terminase_6N
TIP49
SLFN-g3_helicase
MCM
AAA_lid_PRS2_C
T2SSE
Motif
Other DBs
NCBI-GeneID:
106406192
NCBI-ProteinID:
XP_013702266
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All DBs
Position
C9:complement(61514217..61521115)
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AA seq
1122 aa
AA seq
DB search
METEAVVGTVPGVDCFVSLPRQILHVLQSTSSSLLPPLLPVELRSGDRRWPVAWSGSSSS
SSAIEVARVFAESISLPDGTVVQVRVLSNVPKATLVTVEPETEDDWEVLELNAELAESAI
LSQVRILHEAMKFPLWLHDRTVIRFAVVSTFPPKGVVQLVAGTEVAVAPKRRERNLNAKK
GPDALNKDVKIMLRVQDTTRSAFHEADVKGFDVRVALTSVAYIHPETAEKYSLESLQMIS
VSPRIPLKGSVKKDEDLNKKNSDASKVVENDSHSSKKEPRRAILRLVFSDLAAKGHVMMV
ESLRLYLGAGLHSWVHLRGCNVNVNKEVPALSLSPCIFKISEKENVLDRGTDMLGNPNSN
RRSSHPPSGLTTNVDVVDWSVHEKVVTALLSEGLQIEGEQDNAYQLKNKKGLECLTRLWS
LAQRDAIASVTGVDVSSLIVGRETLFHFEVGGLESYKSRDGQPSVVDLLEIRKKDKIVPL
EILYVMTVSDESSLGDKFIAYELTLDRSEKKDNVVHIEPMLEKMNLGEPIFFSSAKERHY
NKGVSPDVSSLAWMGSVVSDVIKRMTVLLSPTAGMWFSKFSIPSPGHILIYGPPGSGKTI
LARAAAKYLEEQKDLLAHVILVSCSALAMEKVQHIRQTLSSVIAEGLEHAPSVIILDDLD
SIISSSSDNEGSQASNAITMLTKFLTDVIDDYGEYRNTSCGIGPLAFVASVQSLEQIPQT
LSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLECSEDILLELAAKCEGYDAYDLEILV
DRAVHAAIGRHLPCESNVSKYTLVKEDFTLAMHEFVPVAMRDITKSASEGGRSGWEDVGG
VTDVKNAIKEMIELPSRFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS
VKGPELLNKYIGASEQSVRDIFAKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQF
LTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEILTVLSRKL
PMADDVNLDPIAAITEGFSGADLQALLSDAQLAAVHEFLSKEDRTEPGTTPMITDPLLKS
IASKTKPSVSEAEKQKLYDIYSQFLDSRKSSKEAKGKRATLA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagcggtggtgggaaccgtccccggcgtggactgtttcgtctcactacct
cgtcagatactccacgtgcttcagtccacgagctcttctcttctccctccgcttctccct
gtcgagctccgctccggtgaccgacgttggccagttgcttggtccggctctagctcatcc
tcttctgcgatcgaggttgctagagtgtttgcggaaagcatttcgttgccggatggtaca
gtggttcaggttcgagttctctctaatgtgccgaaggctactctagtaacagttgaacca
gagactgaagatgattgggaagttctcgagctcaatgcagagcttgccgagtctgctata
cttagtcaggtgaggatacttcacgaggccatgaagttccctttgtggttgcatgaccga
actgtgataagatttgctgtggtttcaacatttccaccaaaaggggtggtacaacttgtg
gcaggaactgaagtggcagtggctcctaagagacgtgaaaggaatctcaacgcgaaaaag
ggtcctgatgctttgaataaagatgtgaaaatcatgttacgtgtacaagataccactaga
tcagcgtttcatgaagctgatgtcaaaggatttgatgtaagggtagcccttacttctgtt
gcctatattcatccagaaactgccgagaaatactcgctagaatctcttcagatgatttcg
gtatccccaagaatacctttgaaaggtagtgtgaagaaagacgaagatttaaataagaaa
aacagcgatgcttcaaaggtggttgagaatgacagtcacagctcgaagaaagagccccgt
cgagcaattcttcgtcttgtattttcggatttagctgccaaaggacatgtaatgatggtg
gagtctcttcgtctctatctaggagcaggccttcactcatgggttcacttaaggggatgc
aatgtcaacgtgaacaaagaagttcctgctctttcactttctccgtgcatctttaagatt
tctgaaaaggaaaacgtgcttgatagaggtacggatatgcttggcaatccaaattctaat
agaagaagcagccatccaccttctggattgaccaccaatgtggatgttgtggactggtct
gtgcacgagaaggttgttacggctcttttatctgagggtttacaaattgaaggagaacag
gataatgcttatcaacttaagaataagaaaggactggaatgccttactcgcctgtggtca
ttggcacagcgggatgctattgcgtcagtcacaggagttgatgttagttcgttgattgta
ggaagggaaactttgttccattttgaagtgggagggctcgaatcttataagtcaagagac
gggcagccttctgttgttgatcttctggagattaggaagaaggacaaaattgttccttta
gaaattttgtacgtaatgacagtctctgacgagtcttcgcttggtgataaattcattgcg
tatgagcttaccttggatagaagtgagaagaaggacaatgtggttcatattgagccaatg
cttgagaaaatgaatcttggcgaacctatatttttctcgtctgctaaagaaagacactac
aataaaggtgtttccccggatgtatcttccttagcgtggatgggctcagttgtgtcggat
gttatcaagaggatgaccgtgttgctgtctccgacagctggaatgtggtttagcaaattc
agtattccttcacctggacatattctcatatatgggcctcctggttcaggaaagacaata
ttagcaagagctgctgcaaagtaccttgaggaacaaaaagacttgttggcacatgtgatt
ctggtatcctgttctgcacttgccatggagaaggttcaacacatccgtcaaaccctttct
agtgtaatagctgaaggcttggaacatgcaccatccgtcatcattttggatgatcttgat
agcattatctcatcatcttcagataacgaaggatctcaagcttcgaatgcgattacgatg
cttacaaaattcctaacagatgttatagatgattatggggagtacaggaatacctcttgt
ggaattggtccacttgcatttgttgcttctgtccagtctctagaacaaattccacagaca
ttgagctcatcaggaagatttgacttccatgtgcaactggctgctcctgctacctctgaa
cgcggggctatactgaagcatgagatacaaaaacgccttttagagtgttcggaagatata
ttgctcgagttagctgcaaaatgtgaaggatatgatgcgtatgacctggaaatattggtc
gatagagctgttcatgctgccattggccgacatctaccttgtgaatccaatgtatcaaaa
tatactctggtcaaagaagattttacgctagctatgcatgaatttgtgcctgttgccatg
cgtgacatcacaaaatctgcttctgaaggtggtcgttcggggtgggaagatgttggaggt
gttactgatgtcaaaaatgctatcaaagagatgattgagttgccatccagatttccgaaa
atctttgcaaagtctcctctgcgtttgagatcaaatgttctcttgtatggcccacctggt
tgtgggaagactcacatagtaggtgcagctgcagcagcgtgttccctacggtttatctca
gtgaaggggcctgagctcttaaacaaatacattggtgcttccgaacaatctgtccgtgat
atatttgcaaaggcagcagccgcagcgccatgcatactctttttcgatgaattcgattca
attgctcccaagagaggacatgacaacaccggggttactgatcgagttgttaatcaattc
ttgacagagctggatggagttgaagttctaaccggggtctttgtatttgctgctacaagt
aggccagatctgcttgatcctgccctactgaggcctggccggcttgatcgtcttcttatg
tgcgactttccatccccaccagagcgattagagattctcacagttctctctagaaagctt
ccgatggctgatgatgttaacctagatcctatagctgcgataactgaaggctttagtgga
gctgatcttcaagctcttctctcagatgcgcaacttgcagctgttcacgagtttctgagc
aaagaagatagaacagagcctggaacgactccaatgataactgatcctcttctgaagtcg
atcgcttccaaaactaaaccatcggtttctgaagccgagaagcaaaagctttatgacatc
tatagccagtttctggattcaagaaaatcgtcaaaagaagcaaagggcaaaagagcaacc
ttagcgtaa
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