Brassica napus (rape): 106406544
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Entry
106406544 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106406544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106406544
03036 Chromosome and associated proteins [BR:
bna03036
]
106406544
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106406544
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106406544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
106406544
NCBI-ProteinID:
XP_013702689
UniProt:
A0A816QFR7
LinkDB
All DBs
Position
C6:30949283..30953816
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AA seq
1042 aa
AA seq
DB search
MASLSILPAPEISTMATSLDSRKKRRISLDGDSIFSEHYEGIRDSLPSLNSPDYFLKPSM
NELVQREIESPGYCSRVPDFTIGRIGYGFIKFLGSTDVRKLDLDQIVKFQRHEVSVYDDE
SSKPAVGEGLNKAAEVTLFVDIACGKERAGHVSSKLKQSAERQGATFISFDPEDGLWKFL
VPHFSRFGLSDDEAEDMATDDNTPGLENRVGLNSDMVVADIDKMETSEPELSHSLPAHLG
LDPGKMKEMRMIMFPNEDLDGSEDLRDQTSFHMTSLTKRNARPSQRSSQRNSHQDTPPVV
RKTPLALLEYNPGNDKSFPGSILMVQQNKNLAVRKSKMGGFELDISHETPVTDNYSRNVV
DAALFMGRSFRAGWGPNGVLLHTGKPIGSSSSQRVLSSVISVEKIAVDKVVRDKKEKVQK
ELIDSAFETPLSLHRELYHEDDEIRFGSFSLKLQRVVTDRVVLSDICRNYIDIIEKQLEV
AGLSTSAKLFSTHQVMVWELIKVLFSERQSTERLSYAASDNEEDMMHDVKEESAEVDTEA
LPRIRRAEFSCWLQECVSHRVQEDVDDLDGSSYLEHLFFLLTGRELDSAVELAISKGDVR
LACLLSQTGGSTVNRNDIMQQLHLWGRNGLDFNYIEKDRVKLYELLAGNIHNAIQDFTID
WKRFLGLLMWHHLSPDSSLPVIFRNYQLLLDQEKAPWPVPIYIDEGTSDGVVSNTKHSDL
LYYLMLLHSREEEEIGFLKTMFSAFSSTDDPLDYHMIWHYRGILEAVGAFTSDDLHAIDM
GFVAQLLSQGLCHWAIYVVLHIPYRKDHPYLHVIVIREILFQFCETWSAMESQRQFIKDL
GIPSEWMDEALAVYYNYHGDFLKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWR
IAMSMDDRKSEIENWDLGAGIYMSFYLLKSSLEEDADTMLELDSPESRNESCRSFVGRLN
ESLAVWGDRLPVEARVAYSKMAEEICELLLSGLSVYPDRDSQLSCFVTAFKAPLPEDVRS
SHLQDAVSLFSLYLSETGQAPA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctttctattcttccagctccggagatttcaactatggctacaagtttggac
tcacgaaagaaaagaaggatctctttagatggagattctatcttctctgaacattacgaa
ggcatcagagattcattgccttccttgaattcacctgactacttcttgaagccgtccatg
aacgagctggttcagcgagaaattgaaagccctggttattgcagccgagttcctgatttc
actattgggaggattggttacggttttataaagtttctcggaagtacagatgttagaaag
ttagatctggatcagattgttaagtttcaaaggcacgaagtcagtgtttatgatgatgag
agctccaagcctgctgttggcgaggggcttaacaaggctgctgaggtcactctgttcgtt
gacatagcttgtgggaaagagcgggctggccatgtttcttctaagttaaaacagagtgct
gaaagacaaggggcaacattcatctcatttgatcctgaggatggtttatggaagtttctg
gttccccatttcagcagatttgggttgagtgatgatgaggcagaagatatggcaaccgat
gataatactccaggtttggagaatcgtgtaggactgaatagtgatatggtggtagctgac
atcgataaaatggaaacttctgagccagagctttctcattctcttccggcccatctagga
ctcgatccaggaaagatgaaagaaatgaggatgattatgtttcctaatgaagatcttgac
ggaagtgaggatcttagagatcaaacttcctttcacatgacatccttgactaaacgaaac
gcaagaccttcacagagaagttctcaaagaaatagtcatcaagacactccgccggttgtg
cggaaaacaccgcttgctttgctggagtataaccctggtaatgataaaagcttcccaggc
agtatcctgatggtccaacaaaacaagaacctggcagtgaggaagtcgaaaatgggaggt
ttcgagctggacatcagccatgagacgccagtaactgataattattcccgtaatgttgta
gatgcagcgttgttcatgggaaggtcgttccgtgcaggttggggcccaaatggcgtcctt
cttcacactggcaagccaataggcagttctagttcccaaagagtattgtcttctgtgatc
agtgtagaaaagatagcagtggacaaagtggttcgggataaaaaggaaaaagttcagaaa
gaacttatcgactctgcatttgagactcccttaagcctccacagggaattgtatcatgaa
gacgatgaaatcaggtttggctctttcagtcttaagcttcagagagttgtcactgatcgt
gtggttctttcagatatctgccgaaactatattgatataatcgagaaacagctggaggtt
gctgggttgtccacctcagcgaagctgttttcgactcaccaagtcatggtgtgggaactc
ataaaagttctcttttctgagagacagagtactgaacgtttgagttatgcagcttcggat
aatgaggaagacatgatgcacgatgtcaaagaagagtctgcagaagttgatacagaagct
cttccacgtatccgaagagcagaattcagttgctggctccaagagtgtgtcagtcaccgt
gtacaagaagacgtggatgatttagatggttctagctaccttgagcacttgttctttctt
ctaactggacgagagcttgattcagctgtggaacttgccatatctaagggagatgttaga
ctagcttgtttgttgagccagactggtggatcaactgtaaaccgcaatgatatcatgcag
cagcttcacctttggggaaggaacgggctggattttaactacattgagaaggatagagta
aagctttacgaattgcttgctggtaatatccacaatgcgatacaagattttacaattgac
tggaagagattcctagggctgttaatgtggcatcatctgtctccggacagttcattgccc
gtcatcttcagaaattatcaactcctactagatcaggaaaaggctccttggcccgtccca
atatatattgacgaaggaacttcagatggcgttgtaagcaacaccaagcattctgacctc
ttgtattatcttatgcttctgcacagcagagaagaggaagaaattggttttctgaagacc
atgttcagtgccttctcttcaactgacgatccacttgactatcatatgatatggcactac
cgaggaatcttagaagcagttggagctttcacttcagatgaccttcacgctatcgatatg
ggatttgttgcacagcttctctctcagggcctttgtcattgggctatctacgttgttctt
cacataccctaccgcaaagatcatccatatctacacgtcattgtcattcgagaaatcctg
tttcaattctgtgaaacttggagtgctatggaatcacagcggcaatttatcaaggacttg
ggtatcccttctgaatggatggacgaagctctggcagtttattacaactaccacggagat
ttcttaaaggctcttgaccacttcatcgaatgcgcaaactggcaaagagctcattccatt
tttatgacatcagttgctcattcattgtttttgtcagctaaccattcagaaatatggaga
attgctatgtcaatggacgatcgcaagtctgagattgaaaactgggacttgggtgctggg
atttacatgtctttctatttactaaagagttcactggaagaagatgctgatacaatgcta
gaactggattcccctgagagcagaaacgagtcgtgcagaagttttgtcggtcgtttaaac
gagtcattggctgtttggggtgatagattaccagttgaagcaagagtcgcatattcaaag
atggcagaagaaatctgcgagttgcttctgtcaggtctgagtgtgtatcctgatagagac
tctcagctaagctgttttgtgacagccttcaaagctcctttaccagaagatgtaagatca
tcacatctgcaagatgctgtctctctcttctctctatatctctcagagacaggccaagca
ccagcttag
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integrated database retrieval system
