Brassica napus (rape): 106406589
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Entry
106406589 CDS
T04128
Name
(RefSeq) 50S ribosomal subunit assembly factor BipA
KO
K06207
GTP-binding protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106406589
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
BipA_C
EFG_C
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
SRPRB
Motif
Other DBs
NCBI-GeneID:
106406589
NCBI-ProteinID:
XP_013702733
UniProt:
A0ABQ8A2U7
A0A078IWS7
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Position
C4:complement(54782933..54787823)
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AA seq
669 aa
AA seq
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MAGPLLRSLWSNTTRRSFSPSQSPHLKSRFSLSSLRAFSAATASTAAAGAPSSSLDPNRL
RNVAVIAHVDHGKTTLMDRILRQCGADIPHERAMDSINLERERGITISSKVTSVFWKDNE
LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNK
VDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTFTKEPPADAKN
MSQLLDAVVKYVPPPKANLDEPFLMLVSMMEKDFYLGRILTGRVSSGVVRVGDKISGLRQ
TDSGSSEKIEEAKVVKLMKKKGTTIVSIGAAGAGDIICMAGLTAPSIGHTVASVEVTTAL
PAVELDPPTISMTFGVNDSPLAGRDGTQLTGGKIGDRLLAEAETNLAINVIPGLSESFEV
QGRGELQLGILIENMRREGFELSVSPPKVMYKTENKQKLEPIEEVIIEINEEHVGSVMEA
LSHRRAEVTDMGPVPGNDGRTRLTLTCPSRGLVGYRCVFSSDTRGTGFMHRAFLRYEKYR
GPLGNVRKGVLVSMGYGTITSHSLMGLEARGTLFVSPGLDSYDGMIIGEHSRDTDLDVNP
VKAKELTNIRSANKDENVKLSPPRLMTLEEAIGYVASDELIEVTPKRIRLRKRCLDVTKR
KSQSKRAKD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctctgcttcgatctctctggtcaaacaccactcgaagatccttctctccc
tctcagtctccccatctcaaatcaagattctcgctctcctccttacgcgccttctctgcc
gccaccgcttccacggccgccgccggagctcccagcagctcgctagatcctaaccgtctc
cgtaacgtggctgtgatagctcatgtcgatcacgggaagacgacgctcatggacaggatt
ctccgtcagtgcggagctgatatcccgcacgagcgtgccatggattcgatcaacctcgag
cgtgagcgagggatcactatctcttcaaaggtgacatccgtgttttggaaggacaatgaa
cttaacatggtggatacacctggtcacgctgattttggtggggaggtggaacgagttgtt
ggtatggttgaaggagctatattagttgttgatgctggagaaggacctcttgcacagaca
aagtttgttcttgctaaggccctgaagtatgggctacgccctattcttctcttgaacaag
gttgatcgaccttcagtttcagaagagaggtgtgatgaagtggagagtttggtgtttgat
ctttttgcaaatcttggtgctacagaggaacaactagattttccggtgctttatgcctcc
gcaaaggaaggatgggcatcttctaccttcaccaaagaacctcctgcagatgcgaagaat
atgtcacagttgcttgatgctgtagttaaatatgttcccccaccaaaagcaaaccttgat
gagccttttctaatgctggtttcaatgatggagaaggacttctatctgggacgtatatta
actggaagagtatcttctggggttgtccgtgtgggcgacaaaattagtggactacgccaa
actgattccggctcctccgagaaaatagaagaagcaaaggttgtgaagctgatgaaaaag
aaaggtacgaccatagtttcaattggtgctgcaggagctggtgatatcatctgcatggct
ggtctgacagcgccatcaataggtcacacggtggctagtgtagaggtcacaactgcgctc
cctgctgttgaactggatccaccaacaatttctatgacgtttggtgtcaatgactctcct
ctggctggtcgtgatggcacccaattaaccggagggaaaattggggaccggctattggcg
gaggctgaaacaaatcttgccattaacgttattccaggcttgtcagagtcatttgaagtc
caagggagaggagaacttcaacttgggatcttgattgagaatatgagacgtgaaggtttc
gagctctccgtttcaccacctaaagtcatgtacaaaactgaaaataaacaaaagcttgaa
ccaatagaagaggtgataattgagattaatgaagagcacgtaggatcagtgatggaagct
ctatcccataggcgtgctgaagttactgacatgggtcctgtccctggaaatgatggtagg
acgagactcacattaacttgtccttcaagaggtttggttgggtacagatgtgtgtttagc
agtgacacccgtggaactggattcatgcatcgtgctttcctaagatatgaaaagtaccga
ggtccacttggcaatgttaggaaaggagtattggtttcaatggggtatggaactattaca
tctcattcactgatgggtttggaagctcgtgggactctctttgtgtctccagggctggac
tcatatgatggcatgatcatcggtgagcactcaagagatacagatcttgatgttaacccg
gttaaggccaaagagctcaccaacattcgctctgctaacaaagacgaaaatgtgaagcta
tctccacctcgcctcatgacacttgaggaagctataggatacgttgcctcagatgaactt
attgaggtcactccaaagaggattcggttgaggaagagatgtctagacgttaccaagcgt
aaatcccagagcaaacgagccaaagattaa
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