Brassica napus (rape): 106406620
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Entry
106406620 CDS
T04128
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106406620
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
106406620
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
106406620
Prokaryotic type
106406620
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
106406620
NCBI-ProteinID:
XP_013702766
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Position
C6:complement(8712656..8717209)
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AA seq
845 aa
AA seq
DB search
MILNRSLRLLLLSCPLKSSPFLLPRRPFSASYPMEKNKAKNGSKSSPFEFNKRRADGFDE
TGKAKKNLERKTRKLNPNTTAYAQVLGTGMDTQDTSSSVLLFFDKQRFIFNAGEGLQRFC
TEHKIKLSKIDHVFLSRVCSETAGGLPGLLLTLAGIGEEGLSVNVWGPSDLKLLVDAMKC
FIPRAAMVHTRSFGPSSTPDPTVLVDDEVVKISAITLEPPRSMEEESCSKSGEISVVYVC
ELAEIMGKFDLEKAKKVFGVRPGPKYSKLQCGESVRSDEKDITVYPSDVMGPSVPGPIVL
LVDCPTESHVAQLLSAKSLESYYSCSGDRGKLVNCIIHLSPSSVTSSPTYQNWMQRFHST
QHILAGHQRKNMEFPILKASSRIAARLNYLCPQFFPAPGFWPPQHVTNSIVDSTPSDQDS
NLGKSFSAENLLKFTLRPYAHLGMDRSCIPPELTSSLVLDELLSEIPEIKDKTEEIKQLW
NKPNGETESNTLLPSCLENIRRDDMEIVLLGTGSSQPSKYRNVSAIYIDLFSKGSLLLDC
GEGTLGQLKRRYGLDGADEAVRKLRCIWISHIHADHHAGLARILALRCKLLKGVAHEPAI
VVGPRSLKHFLDAYQRLEELDMEFLDCRSTTKTSWASLEGGKEEGSLFSKGSPMQSVFKT
PMTDLPCLKNLKKVLGEIGVEDLISFPVVHCPQAFGVVVKAAERLNSVGKRIPGWKMVYS
GDTRPCPEVVEASQDATVLIHEATFEDDLIDEALAKNHSTTKEAIDMGSSAGVYRIVLTH
FSQRYPKIPVIDESHMHNTCIAFDLMSINVADLQVLPKVLPYFKTLFKDEIIEEDIDDIA
LEEAL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgatattaaacagaagcctacgacttctcctcctctcttgtcccttaaagtcgtctcct
ttccttcttcctcgcagacccttctctgcttcatatccaatggagaagaacaaagccaag
aacggttcaaagtcatctcctttcgagttcaacaagagaagagctgatgggttcgacgaa
acaggcaaggccaagaagaatctcgaacgaaaaacacgcaagctcaatcccaacactact
gcttacgcacaggtccttggaacgggaatggatacacaagatacttcgtcttctgtatta
ctcttctttgataaacaaagattcatcttcaatgctggagagggcttgcaacgtttctgt
acagaacataagatcaaactatcaaagatagatcatgtgtttctgtctcgtgtctgctca
gagactgctggtggacttccaggtcttttactaactcttgctggtatcggtgaagaaggg
ctttcggtgaatgtatggggaccttcagatcttaagttacttgttgatgcaatgaagtgt
tttattccacgcgctgctatggttcacacacgtagttttggtccctcgagtacacctgat
cctactgttcttgtggatgacgaagttgtgaaaatatcagccattaccttagagccacct
cgctctatggaagaagaatcttgcagcaaatccggcgagatctctgtcgtgtatgtatgt
gaattagctgagataatgggcaagtttgacttagagaaggccaagaaagtctttggtgta
aggcctggtccaaagtatagtaaacttcagtgtggagaatcagtgagatctgatgaaaag
gatattacggtttatccgagtgatgtgatgggaccttcagttcctggtcccattgttctc
cttgtggactgtccaaccgagtcacacgttgcacagctcttatcagctaagtctttggag
agttactattcgtgttctggcgatagagggaagttggtgaattgtattatacatctaagt
ccatcttcagtaacaagtagtcctacttaccaaaactggatgcagaggtttcattcgact
caacacattcttgctggacaccaaaggaagaatatggagtttccaattctgaaagcaagt
tcaagaatcgctgcaagacttaactacttatgcccacagttctttcctgctcctggcttt
tggcctcctcaacatgttacaaactcaatagttgattccaccccttcagaccaggattca
aatcttggtaaaagcttttctgctgaaaatctcctcaagttcactttgcgtccttatgct
catcttgggatggatagatcttgcatccctcctgaactgacatcctcactagtactggat
gagctgctttcagaaattcctgagatcaaagataaaaccgaagaaatcaagcagttgtgg
aacaaaccaaacggtgagacagagagcaacactcttcttccaagctgtcttgaaaacatt
agacgagacgatatggagattgttcttctaggcactggctcttcccagccttcaaaatac
agaaacgtcagcgccatttacattgacttattctctaaaggcagtcttctcctagactgt
ggtgaaggaaccttggggcagcttaaaagaagatacggtttagatggtgctgatgaggcc
gttagaaaactgagatgtatatggatctctcacatccacgctgatcaccatgcgggtctc
gcgaggatcctagctctcagatgcaagcttctgaaaggagtggctcatgagccagcgatt
gtggtgggaccgaggtcgcttaaacactttcttgatgcttatcaaagactggaggagttg
gatatggagtttcttgattgtagaagcaccacaaagacttcttgggcttctttagaaggc
ggcaaggaagagggttctttgtttagtaaaggaagtcctatgcagagtgtcttcaaaact
cccatgacggatctgccatgtttgaagaatctgaagaaggttcttggcgaaattggtgtg
gaggatttgattagcttccctgttgttcattgtcctcaagcctttggtgtcgttgtaaaa
gcagcggagagattgaacagcgttggaaaacgtatccctggatggaagatggtttactca
ggcgacacaagaccttgtcctgaggttgtggaagcatcacaagatgcaacagttcttata
cacgaggcaacatttgaagatgatttgatagatgaagcattggcaaaaaaccacagcacg
actaaagaagcaattgatatgggatcttctgcgggtgtgtataggattgttctcacgcat
tttagccagagatatccaaagattccggtgattgacgagtctcatatgcataacacttgc
attgcctttgatttgatgagcataaacgtggcggatttgcaagtgcttcctaaggtttta
ccatatttcaagactttgtttaaagatgagatcattgaggaagatatagatgatatcgct
ttggaagaagctttgtga
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