Brassica napus (rape): 106406994
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Entry
106406994 CDS
T04128
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106406994
09122 Translation
03013 Nucleocytoplasmic transport
106406994
03015 mRNA surveillance pathway
106406994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106406994
03041 Spliceosome [BR:
bna03041
]
106406994
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106406994
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
Cap binding complex
106406994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
106406994
NCBI-ProteinID:
XP_013703222
LinkDB
All DBs
Position
A6:28046277..28048376
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AA seq
260 aa
AA seq
DB search
MASLFKEQAKLSAYRDRRFSGTQEEFEEALRTSSTVYIGNVSFYTTEEQIYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYVSGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGGSYPAPAPSNYERR
GGPRGGGGYGQGGSNRHGRGGDFHRKRQRDDDRYGRDNSRRNSDHETRRDSDHDMRPEKN
PRFRESGDSDDDGEDDRKRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagcaaagctctcggcttatcgagatagaagattctca
ggcacacaggaggagttcgaggaggcgttgaggacctcttccaccgtctacattgggaac
gtctctttctacacaactgaagagcagatttacgagctcttctccagagctggagagatt
aaaaagattatcatgggacttgataagaacaccaaaaccccctgtggtttctgtttcgtc
ctgttctactcgagagaggacacagaggatgcagtcaagtatgtaagtggcaccattctt
gatgaccgccctattcgtgtggactttgattggggcttccaagaaggaaggcaatgggga
cgtggtagaagcggtggccaggttcgagacgaataccgtacagattacgatcctgctaga
ggtggttatggaaaattagttcagaaggaactcgaagcacaacgacagctcgtagattac
ggtactggttcacttggaggttcctatcctgcacccgcgccatccaattatgaaagacgt
ggtggacctcgtggtggagggggatatggccaaggaggatcaaatcgccacggaagaggc
ggagattttcatcggaaacgtcaaagggacgatgatcgttatggacgcgacaactcaaga
agaaactcagatcatgagactaggagagactctgatcatgacatgagaccggagaagaac
ccacgattccgtgagagcggtgactcagacgatgacggtgaagatgatcggaagaggtct
taa
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