Brassica napus (rape): 106407536
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Entry
106407536 CDS
T04128
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106407536
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106407536
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
C2HC_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106407536
NCBI-ProteinID:
XP_013703862
UniProt:
A0ABQ7Y2Z7
A0A078FBM8
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Position
C9:complement(64264772..64268134)
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AA seq
507 aa
AA seq
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MQMIPGDPFSISSSMGGFVHQEQHLHHLQQHIQDINPNSNPNPNAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKFKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNSAISTTTMTTNLNFGND
SHVMNNPNLPHGFVHRGVHHPDINAAISQFGLGFGNDLTGMHPQGLSEMVQMTSSGNHHL
FPLSSSSVLPVFSGHHHNQQFQIPTSSTNPNFTLSSSSTSQQTSASLPSLQQQHQTPKDS
SFSPLFSSSCETKQNKPLSPMSATALLQKAAQMGSTRSNSTTAPSIFAGPTMTSSSSAAS
HPPPRSSSPVMIQQQLNNNFNTNVPRDTHNSVENNYRFQSNRSSTNPVQQMGLTRDFLGV
SNEHHPHQTGHRPFLPQELARFAPSSG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttccatgggagggtttgtccat
caagaacagcatcttcatcatcttcagcagcatatccaggacataaaccctaattctaac
cctaaccctaatgctaaaccaaactcttcatcagctaagaagaagagaaatcagcctggc
accccagatccagatgcggatgtcatcgctctatcgccaaccaccctcatggcaacaaac
agattcgtgtgcgagatctgcaacaaaggatttcaaagggaccagaacctacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtccaacaaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcttctagggccctt
ggagacctcactggaatcaagaaacactatagccgcaagcacggcgaaaagaagtttaag
tgcgaaaagtgttctaagaaatatgctgttcaatctgattggaaggcgcacgcgaaaact
tgtggcactcgtgagtataagtgcgactgtggcacgttgttctccaggaaagatagtttc
attacgcatagagcgttctgcgatgcattgacagaagaaggtgcaaggatgagttcactt
agtaataattcagcgatctctacaacaacgatgacgacgaatcttaattttggaaatgat
tcacatgttatgaataatccaaatcttccacatggatttgtccaccgaggggttcatcat
cccgacattaatgctgctatctctcagttcggtttagggttcggaaatgacctaactgga
atgcatccgcaaggtttatccgagatggtacaaatgacctcctctgggaaccaccatctc
tttccgttgtcttcatcatcagtcctccctgtcttctccggccaccaccacaaccaacaa
ttccaaattcccactagttccacaaaccctaattttaccttatcatcatcctcaacatca
caacaaacctcagcttcactaccatcactacaacaacaacaccaaactccgaaagactct
tctttctccccactcttctcatcctcctgcgaaaccaaacaaaacaagcctctctcccca
atgtctgccactgctctcttacaaaaagctgcacaaatgggatccactagaagcaactcc
accacggctccatccatcttcgccggcccaacaatgacgtcatcctcatccgccgcctct
catcctcctcctcgatcatcttctccagtgatgatccaacaacaactcaacaacaacttc
aacaccaatgtcccaagagatacccataatagtgttgaaaataactatcgatttcaatca
aaccggtcaagcacaaacccggttcagcaaatgggtttaacccgggattttcttggagtg
agcaacgagcaccaccctcaccaaactggtcaccgtccgtttttgcctcaggaacttgca
agatttgctccatcgtcgggttga
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integrated database retrieval system