KEGG   Brassica napus (rape): 106407809
Entry
106407809         CDS       T04128                                 
Name
(RefSeq) lysine-specific demethylase JMJ25 isoform X2
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106407809
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     106407809
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106407809
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2
Other DBs
NCBI-GeneID: 106407809
NCBI-ProteinID: XP_013704124
LinkDB
Position
A3:complement(37604123..37611741)
AA seq 882 aa
MGSVSLEHYSLLMEKSLTYSWWTKKKRSFRLFKSKGSTSRRGDDEAWTSSKPAISRVYCR
KRKHSVDDHDLALETNDKRSSKDVKRSDDDIMLSDWITRRRNTVENREEEVDAKSEDEDD
CTILENQSSRKKFYRRQVELEEDLEWEKEVNLISKMKEASSRRRRKASNIPENDTECKER
NPICHQCLKGARVTLLRCSECEDTMYCLQCTRKWYPELPEDDVVDKCPSCRKNCNCSRCL
HLNGLIKTSNKELSISERRHHLQYLISLMLPFLKTISESQSEEIEIEAKVQGILPSEVDV
NRAVSYCDERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIRQGSISERPEIKLHYVDK
GYKYMHGLEMEPSSSSVSEEDEEAKPSPQWNAGANGSITCAPKALGGCGECTLKLQRILP
RMRMSDLEQKAETLLASYIISLPRELNCKCSALETDMRRKAASRMRSSDNYLFCPDSIDV
LKEEVLLHFQEHWAKGEPVIARNVLDSTPGLSWEPMVMWRALCDSSTSSSKIMSHVKAID
CLSQCEVDVNTRDFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPF
QEYSDPRTGILNIAAKLPEALIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNIL
THTAEITLSQEQISAVKDIKQKHKEQNKFEERGYGVACSQEEEEMNMTEILSHEKDETGS
ALWDIFRREDVPKLEEYLRKHFKEFRHAYCCPVTKVYHPIHDQSCYLTVEHKRKLKAEFG
IEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFRQLPKNH
KAREDKLEASLFSLYQLINVFFLLLLYVRVFVCLCMVDAGGV
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgggcagtgtgagtttggagcattacagtcttctgatggagaaatctctaacttattct
tggtggaccaagaagaagagaagttttagattgttcaagtccaaaggttctaccagtagg
aggggagatgatgaggcctggacgagctccaagcctgcgatatcgagagtctattgtagg
aaaaggaagcattccgtagacgatcacgatttggcgcttgaaaccaacgacaaaagaagc
agcaaagatgtgaaacgctctgatgatgatatcatgctaagtgattggattactaggcgg
aggaacaccgtggaaaatagggaagaagaagttgatgctaaatctgaagatgaggatgat
tgcacaatattagagaatcagagttctagaaaaaagttctacagacgccaggtagaactt
gaagaagacctggaatgggaaaaagaagttaacctgatttctaagatgaaggaggcatca
tcccgacgaagaaggaaagcttccaacattcctgaaaatgacacagagtgtaaggaacgc
aatccaatttgccaccagtgcttgaaaggggcaagggtaactcttctcagatgcagtgaa
tgtgaagacaccatgtactgtcttcaatgtacaaggaaatggtatccagagttacctgag
gatgatgtcgttgacaaatgcccttcctgccgcaaaaactgtaactgcagcagatgcttg
catttgaatggtttaatcaagacatcgaacaaggaactctcaatttctgaaagacgccat
catctccaatacttgatttcactgatgcttccatttctgaaaacaatatctgaatcccag
agtgaagagattgaaattgaggcaaaagttcaaggaatactgccatctgaagttgatgta
aatagggcagtaagctactgtgatgaacgtgtatactgtgatcattgcgcaacttcaatc
gttgacttgcaccggagctgcccaaagtgctcttacgagctttgtctgaaatgctgccaa
gagattcgccaaggatcgatctctgaacgccctgaaataaagttacactatgttgacaaa
ggatacaagtatatgcatggtctagaaatggagccgagctcctcttctgtatctgaggag
gacgaagaagctaaaccatccccccagtggaatgctggcgccaacggaagcatcacttgt
gcaccaaaagcactaggtggttgcggtgaatgtacgttgaagcttcagcgaatcttaccg
cggatgcggatgtcagacttggaacaaaaggctgagactctcttggcatcgtacattata
agcctccctagagaattgaactgtaagtgctctgccttggagacagatatgagaaggaaa
gcagcttcgaggatgagatcaagcgacaactacttgttctgccctgattcaattgatgtc
ttgaaggaagaagtgcttctgcatttccaagagcattgggcaaaaggtgaaccggtaatc
gccaggaacgttcttgatagcacacctggtttaagctgggagccgatggttatgtggcga
gctttatgcgattcatcaacatcaagttctaagatcatgtctcacgtcaaagcaattgat
tgtttatctcagtgtgaggtggatgtgaacactcgtgacttctttgaaggttacagcaag
ggaagaacatatgaaaacttctggcctgagatgttgaagctaaaggactggcctccttcc
gataaatttgaagatcttttacctcgccactgtgacgagttcatatccgcattacctttc
caagaatatagcgaccctagaactgggattctgaacattgcagcaaagcttcctgaagca
ctcatcaaaccggacctgggtcctaagacttacattgcctatgggattccggacgagctc
ggtagaggcgattccgtgaccaagcttcactgtgatatgtctgatgcggttaatatactg
acgcatacggctgagataacgttaagtcaagaacagatatctgcagttaaagatataaag
cagaaacacaaggaacagaacaagttcgaagaacgtggctatggtgttgcatgtagccaa
gaggaagaagaaatgaacatgacagagattctaagccatgaaaaggatgaaacgggaagt
gctctttgggacatatttaggagagaagatgttcccaagttggaagagtatctgagaaaa
cattttaaagagtttaggcacgcttattgttgcccagtcacaaaggtttatcatccgata
catgaccaatcatgctatttaaccgttgagcataaaagaaaactcaaggcggagttcggg
atcgaaccatggacgtttgtgcaaaagctaggagaagccgtgtttattcctgccggctgt
cctcatcaagttcggaatctgaagtcgtgcacaaaagtggcagtagactttgtatcacca
gagaacattaaagagtgtctgcgtctgacagaggagtttcgccaacttccgaagaaccat
aaggccagagaggacaaacttgaggcaagtcttttctctctttaccaattaatcaatgtc
ttctttttgttgttgttgtatgttcgtgtgtttgtgtgtctatgtatggttgatgctggt
ggggtttag

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