Brassica napus (rape): 106407815
Help
Entry
106407815 CDS
T04128
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106407815
Glycosyltransferases [BR:
bna01003
]
O-Glycan biosynthesis
O-linked Gal type
106407815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
106407815
NCBI-ProteinID:
XP_013704130
LinkDB
All DBs
Position
A6:complement(10956906..10959746)
Genome browser
AA seq
670 aa
AA seq
DB search
MRNSKLEKCTMFSKKRSIQILMAVGVLYMLLVTLEIPLVYRSGFNTLSHDPLTRPDHLGS
ELDLQERRRAPGRPFRSLIYQETLSVAPARSQRRRLSQEIVISGLKFDPDPSSRDESLEL
HESAKEAWEVGRKLWEELESGKALKALKEEKKTVKLGSSSCPVSVSLSGSDLLTRGKVIE
LPCGLTLGSHITVVGKPRAAHSEMDPKISMGNEEDEAVKVSQFIMELQGLKAVEGEDPPK
ILHFNPRLKGDWSGKPVIEQNTCYRMQWSSAQRCEGWRSSDDEETVDGQVKCEKWVQENA
TSYSKEETNKATWWLSRFIRRSKKVAVEWPFPFTEEKLFVLMLTAGLEGYHVSVDGKHVT
SFPFRTGFTLEDATGLTVTGDIDVQAVFAGSLPTSHPSFAPQRHLDLSRKWQAPSVSGEE
VELFIGILSAGNHFAERMAVRKSWMQHKLIRSSKVVARFFVALHSRKSINVELKKEAEFF
GDIIVVPYLDSYDLVVLKTVAICEYGAHQLAAKYIMKCDDDTFVRVDAVLREAKKTPTDR
SLYIGNINYYHKPLRQGKWAVTYEEWPEEDYPPYANGPGYILSTDIARFIVKEFEQHKLR
LFKMEDVSVGMWVEQFNNSVKPVDYEHSINFCQFGCTENYLTAHYQSPRQMICLWDKLVL
TGKPHCCNMR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactcgaagctagaaaaatgcacaatgttcagcaagaagcgatcgattcagata
ctcatggcggtcggtgtactgtacatgcttctcgtcacgctcgaaatccccctcgtctac
agatccggattcaacactctatcacacgatccgttaacccggcccgatcatctcggtagc
gagttggatctgcaagagagacgacgagctccagggcgtccttttaggagcttgatttat
caagaaacgctatcagtggcccctgctcgatctcaacggagaagattgtcacaagagatc
gttatatccgggttgaaatttgacccggatccgagtagcagagacgagtccttggagctc
catgaatccgccaaagaagcttgggaagttgggagaaagctatgggaagagctggaatct
ggaaaagcccttaaagccttaaaggaagagaagaagactgtgaagcttggctccagctca
tgcccggtctccgtttccttatccgggtcggatcttttgacacgtgggaaggtcattgag
cttccttgtgggttaacactcggatcacacatcacggtggtggggaagccacgcgctgca
cactctgagatggacccgaagatatcaatggggaatgaagaagatgaagctgtgaaggtt
tcgcagtttataatggagcttcaagggctgaaggcagtggaaggggaagatccgcctaag
attcttcatttcaatccaaggcttaagggtgactggagtggtaagcctgtgattgagcag
aacacttgttacaggatgcaatggagctcggcgcaacgttgtgagggctggagatcgagt
gatgatgaagaaacagttgatggtcaggttaagtgtgagaagtgggttcaagaaaatgct
acttcttattctaaagaagagactaacaaggcaacatggtggctgagtcggtttattcgc
aggagcaagaaagtagctgtagaatggccatttccattcactgaggagaagctcttcgtg
cttatgctaactgctggattggaaggttaccatgttagtgtcgatgggaaacatgtcaca
tctttccctttccgaactgggtttacgcttgaggatgctactggtctaactgttactgga
gacatagatgttcaagctgttttcgctggctctctcccaacctcgcaccctagttttgct
cctcagaggcatcttgatctctcaagaaagtggcaggccccatcagtttctggtgaagaa
gttgagttattcattggtatcctctctgctggtaatcattttgctgagcggatggctgtg
aggaagtcttggatgcaacataaacttatcagatcttccaaagtagtggctcggttcttt
gtagcattgcactcaaggaagtcaatcaatgtggagctaaagaaggaagctgagttcttt
ggggacataattgtagtgccttatttggacagctatgatctagttgtcctgaaaactgtt
gcaatttgcgagtatggggctcatcagttagctgccaaatacataatgaagtgtgacgat
gacacatttgtccgagtagatgcagttcttagggaagcaaagaagacacccacagatcga
agcttgtacattggcaacatcaactattatcacaagcctcttcgccaggggaagtgggct
gttacatatgaggaatggccagaggaagactatccaccttatgccaatggacctggctac
atattatcaacagatatcgctcgtttcatcgttaaagagtttgagcaacacaaactaagg
ttattcaaaatggaagacgtgagcgtgggaatgtgggtggaacagttcaacaacagcgtg
aaaccagtggattatgagcacagcattaacttctgccagtttggttgcacagagaattac
ttaacggcgcattaccaatcgccaagacagatgatctgcttgtgggacaaattggtcttg
acgggcaaacctcattgctgcaacatgagatga
DBGET
integrated database retrieval system
