Brassica napus (rape): 106408942
Help
Entry
106408942 CDS
T04128
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106408942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106408942
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106408942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
106408942
NCBI-ProteinID:
XP_013705079
UniProt:
A0A078HR19
LinkDB
All DBs
Position
A3:complement(28979190..28982790)
Genome browser
AA seq
741 aa
AA seq
DB search
MFDCVKKSVKSQVISGQREKFVRLDSMDSRYSQGAEAGLNKCTLNLQGPSRANGAGQGNN
NNASSGSFKKGFRRGSKGLWSLGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKL
FVTSCILAVSVDPLFLYLPFINDSGKCIGIDRRLATIATTLRTFIDVFYLFRMALQFRTA
FVAPSSRVFGRGELVIDPAQIAKRYLQQYFIVDFLSVLPLPQIVVWRFLYTSTGGSVLET
KQALRSIILVQYIPRFIRIYPLSKELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWY
LLALERVNGCWKKACLVDGQNCTRNFLFCGNENMDGYAAWNTIKESVLQKSCPVNVTDGD
NPPFDFGIYLRALSSGIVSSESFVAKYFFCLWWGLQNLSTLGQGLETSTYPGEIIFSIAL
AVAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPDLRERVRRYDQYK
WLETKGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMEERLLDAICERLKPCLYT
EKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKS
GSNLPSSTRTAKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIF
IQAAWRRYVKKKKLEQLKKEEEEEEEEGEGHVASIRATFLASKFAANALRKVHQNRIAAK
STKELVIFQKPSEPDFSADDP
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtgtcaaaaaatcagtaaaatcacaagttatcagtggccaacgcgagaag
ttcgtaaggttggatagtatggattctagatactcgcagggcgctgaagcaggtctcaac
aaatgcacactcaatctccaaggaccatcacgtgctaatggtgctggccaaggcaacaac
aacaatgcgtcatctggttcgtttaagaaaggttttagaagaggctccaaagggctctgg
tctctaggaagatcgatcggtctcggcgtttcgcgagctgtgttccctgaagatctcaaa
gtatctgagaagaagatattcgatccgcaggacaagtttcttttgctatgcaacaagctc
tttgtcacttcttgcatcctcgctgtgtcagtggatcctctcttcttgtatcttccgttt
attaatgatagcggcaagtgtatcggcattgaccggagattggctaccattgcaacaacg
ctgaggactttcatcgatgtgttttatcttttccggatggctctgcagtttaggacagct
tttgtggctccctcttctagggtttttggtcggggggagcttgtgattgatcctgcacag
atagctaaacggtatctgcagcagtacttcatcgttgactttctttctgtgcttccactt
ccacagattgtagtttggagatttctctacacatctacaggtgggagtgtgttggaaaca
aagcaagcgttacgttccatcattttagttcagtatattccgcggtttattcggatatat
cccttaagcaaagagctcaagagaacagctggggtgtttgctgagacagcttgggctggt
gcagcttattacttgctactctacatgcttgctagtcatattgttggggcgttatggtac
ttgctggctttagaacgagtcaacggttgctggaagaaggcttgtcttgttgatggccag
aactgtaccagaaacttcctgttttgcggtaatgaaaacatggatggttacgctgcttgg
aacactatcaaagagtctgttcttcagaaaagctgtcctgtcaatgtgactgatggtgac
aatcctccttttgatttcggaatctacttaagagccttgtcttctggcattgtctcgtct
gagagctttgttgctaaatacttcttctgtttgtggtggggacttcagaatctcagcaca
cttggtcaagggcttgagacgagtacataccctggagagatcatattctccatagcacta
gctgttgctgggcttctactctttgctcttctcattgggaacatgcagacttatctccag
tcactcacaatccgccttgaggagatgagagtgaagagacgtgactcagagcagtggatg
catcaccggatgcttccaccagacctgagagaacgggtcagacgttatgatcagtacaag
tggttggagacgaaaggagtcgatgaagagaatctggttcagaacctcccaaaggatctg
agaagagacatcaaacgccatctctgtctggctttggtccggagggttccattgtttgag
aatatggaagagaggctgcttgatgcaatatgcgagaggttgaagccgtgtctatacacg
gagaaatcttacctggtccgtgaaggtgaccctgtcaacgagatgctcttcattatccgt
ggccggctcgagagtgtgacgacagacggtgggagaagtggtttcttcaaccgtagtttg
ctcaaagaaggagacttctgcggtgaagagcttttgacatgggcgcttgatcccaagtcc
ggctccaacctgccttcctccacaagaaccgcaaaggctctaacagaagtagaagccttc
gctttgatagctgatgagctcaagttcgtggcgagccagttcaggagactgcacagcagg
caagttcagcatactttcagattctactcgcagcaatggaggacttgggctgctattttt
atacaagccgcgtggagacggtacgtgaagaagaagaaacttgagcagcttaagaaggaa
gaggaggaagaagaagaagaaggagaagggcatgttgctagcattagagctacgttcttg
gcttctaagtttgcagcgaatgcgcttcgtaaagttcaccagaaccgtattgcagcaaag
tctactaaagagcttgtgatttttcagaagccttctgaacctgatttctctgctgatgat
ccttaa
DBGET
integrated database retrieval system
