Brassica napus (rape): 106409529
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Entry
106409529 CDS
T04128
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 9, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106409529
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106409529
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106409529
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106409529
2.5.1.29 geranylgeranyl diphosphate synthase
106409529
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106409529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
106409529
NCBI-ProteinID:
XP_013705602
UniProt:
A0A816TMY1
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All DBs
Position
A5:23945578..23947818
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AA seq
359 aa
AA seq
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MATVHLSSSSLFIQFKGRRYNSISTVKSLQKRNVLSISSALTSRGGDMVTPHGKGNDHNS
SIFDFKSYMILKAESVNAALDVCVPLMKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVG
GDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKLFGEDMAVLAGDALLAL
AFENMTVVSSGLVAPDRMVRAVIELAKAIGTKGLVAGQVVDLRSERISPEDAGMERLEFI
HLHKTAALLEAAAVIGVIMGGGTEEEIERLRKYARCIGLLFQVVDDILDVTKSTEELGKS
AGKDVMAGKLTYPRLIGLEKSRELAETLSREAKEQLQGFDSNKAAPLVGLASYIASRHN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttcatctcagctcatcctccctcttcatacaattcaaaggaagaagatac
aactctatatccactgtcaagagtcttcaaaaacgcaacgttttgtctatctcatctgct
ctcacgtcacgaggcggagacatggttacaccacacggtaaaggcaatgatcacaactcc
tccatctttgacttcaagtcatatatgatccttaaagcggaatctgtgaacgctgctcta
gacgtttgcgtaccgcttatgaaacccctcacgatccaagaggcggtgcggtactcattg
ctggctggtggaaaacgtgtgaggcctcttctatgtattgctgcctgcgagctcgtgggt
ggcgacgaggctactgccatgtcggcagcttgtgcggtggagatgatacacactagctct
ctgattcatgatgaccttccctgcatggataatgctgatctccgcagaggcaagccaacc
aaccacaagttatttggagaagacatggcggttttggcgggtgatgcacttcttgctttg
gcttttgaaaacatgacggttgtgtcaagtggtttggtcgctcctgataggatggttcgc
gcggtaattgagctggcaaaggccatagggacaaaagggcttgtggctgggcaagtggtt
gacctacgcagcgagagaataagtcctgaagacgctggaatggagcgtctagagttcatc
caccttcacaaaacagctgcattgttggaggcagctgcggttataggggttataatggga
ggcggaacggaggaagagatcgagaggcttagaaagtatgcgagatgtattgggctgttg
ttccaagtggttgatgatattcttgacgtaacaaaatctaccgaggaattgggtaaaagc
gccgggaaagacgtcatggctgggaaactgacgtatcctaggttgattggtttggagaaa
tctagggaacttgcggagacattgagcagagaagcaaaggaacagcttcaagggtttgat
tcgaataaggcggcgccactggtgggtctggctagctacattgctagcagacacaactga
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