Brassica napus (rape): 106409723
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Entry
106409723 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT4
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106409723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106409723
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106409723
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106409723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106409723
NCBI-ProteinID:
XP_048620306
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Position
C7:50805993..50807479
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AA seq
285 aa
AA seq
DB search
MNDGTHHFSSTTKTHAVVTNIVGPAATSVYELLECPCQNGHTLCSTCKVRVHNRCPTCRQ
ELGDIRRLALEKVAESLELPCKYFNLGCPEIFPYYSKLKHESLCNFRPYGCPYAGSECGV
LGGIPFLVAHLRDDHKFDMHAGSTFNNRYVKSNPREVENATWMLTVFHCFGQYFCLHFEA
FQLGVGPVYMAFLRFMGDEEEARRYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDG
LIIQRNMALFFSGGDRKELKLRVTGKVWKEQHSPDSGVCMPNMSS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacggaactcaccacttctcttccaccaccaagactcacgccgtcgttaccaat
atagtcggtccggcggcaactagcgtctacgagcttctagagtgcccttgtcaaaatgga
cacacgttatgttcgacctgtaaagtgagagtgcacaaccgttgtcccacgtgtagacaa
gagcttggagatatacgacgtttagctctcgagaaagtagccgagtcccttgagctacct
tgcaagtatttcaacctcggatgccctgagatttttccttactacagcaaacttaaacac
gagtctctttgtaacttcagaccttacggttgtccttacgctggctccgagtgtggtgtc
cttggaggcatccctttcctcgtggctcatctcagggatgatcataaatttgacatgcac
gcgggctccacttttaacaaccgttacgttaaatccaatccgcgtgaagtagagaacgcc
acgtggatgttaactgtgtttcattgctttgggcaatacttctgtctccattttgaggcg
ttccagctaggggtgggtcctgtatacatggcgttcctgagattcatgggagacgaggaa
gaagctaggaggtacagctacagcttagaagttggaggcagtgggaggaagctaacatgg
gaagggaccccgagaagcatcagagatagtcataggaaagtaagagacagcaacgacggt
ctcatcatccaaagaaacatggctctcttcttctccggcggtgataggaaagagcttaaa
cttagagtcactggtaaagtctggaaagaacaacacagtccagattctggggtttgcatg
ccaaacatgtcttcctga
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