Brassica napus (rape): 106410234 Help Entry 106410234         CDS       T04128                                  Name (RefSeq) probable helicase MAGATAMA 3   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bna  Brassica napus (rape) Brite KEGG Orthology (KO) [BR:bna00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bna03021]     106410234 Enzymes [BR:bna01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      106410234     5.6.2.5  RNA 5'-3' helicase      106410234 Transcription machinery [BR:bna03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      106410234 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 AAA_30 AAA_19 UvrD_C_2 AAA_16 Thiopep_pre Motif Other DBs NCBI-GeneID:  106410234 NCBI-ProteinID:  XP_013706174 LinkDB All DBs Position C7:51741363..51746988 Genome browser AA seq 1291 aa AA seqDB search MASEGKLLFDLNELPTEDDDGGSVNQPQKAIPSASPNTSAGLLATPQDKANSRVFSHAST ASGFQPFVRPTASQHTDVVVERKTDEVAHKEANVAHKEANVASSSVVPDDAGAPEREEGE LMESEVPAGENVHGSMAMPETGVSSDDSKVTEKGCSTVGLDVTSDSGLQKRNVNLISEGS GKDGASIDGPQEQGLTVKQRETKGVEARHAIKCANTTVKRKWDQQKETMLGKKRNRQTMF LNPEDVKQAGPIKTTTPRRQNFPQPVVTRTVRESRAGAEQGTSEQKSESNGESQPGLVAK TRRMNGDAGPSSEGTTTSVSRQGSWKQPTYSQSKPGQSSSRQVSLRSQSSADSKFGNKKL TSFKKPVTNSTQYQDTSVERLIREVTNEKFWHHPEDTELQCVPERFESMDEYVRVFEPLL FEECRAQLYSSWEESCEANSYMKVRIKFVERRERGWYDVILNSLNECKWPFKEGDVAVLS TPVPESEGEHEDGGRVAGTVRRYIPVDTRDPHGAILHFYVGDSYDSGSNVDDNHILRKLK PKEIWHLTVLGSLATTQREYVALHAFGQLNPQMQNAILRPSPEQFPNYGEQTPTVPDCFT PSFAGHLHRSFNAPQLAAIHWAAMHTAAGTSSGAKRQDPWPFTLVQGPPGTGKTHTVWGM LNVIHLVQYQQYYTSLLKKLAPESYKQVNEGSSDNIVSGSIDEVLQNMDQNLFRTLPKLC AKPRMLVCAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVGVDTQTRAAQAVSVERRS DQLLAKSRDEILGHMHNLRLREAQLSQEIAGLKRELTAAAFTNRSQGSVGVDPDVLMVRD QTRDALLQRLSAVVEARDKDLVEMSRLLIVEGKFRAGNSFNLEEARASLEASFANEAEIV FTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVI SKAAGTLLYSRSLFERFQLAGCPTLLLTLQYRMHPQIRDFPSRYFYQGRLTDSESVTTAP DEIYYKDSVLKPYLFFNISHGRESHRGGSVSYENIDEARFCVGLYMHLQRTLKSLGGGKV SVGVITPYKLQLKCLKMEFGNALGPDEVKEIYINTVDAFQGQERDVIIMSCVRASSHGVG FVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITDARERNCFMEMESLPKDFPVP SFIPKAPNARGFRPGGSRTRSIDMLHNETRSGTPSEDDERQQQQLSTRMTTFPRNGNFRR ENSVVDDSDQSWQHGTIQRRQNFGRPFGRRD NT seq 3876 nt NT seq  +upstreamnt  +downstreamnt atggcttcagaaggaaaattgttatttgatcttaatgaacttcctacggaagatgatgat ggtggtagtgtgaatcagcctcagaaggctatcccatctgcaagccccaatacttctgct ggcttgctggcaacaccccaagataaagcaaacagcagagtgttctcgcatgcatcaacg gcgtctggctttcagccttttgtccgccccacggcttctcaacatacagatgtagtggtt gaacggaagacagacgaggttgctcataaggaagcgaatgttgctcataaggaagcgaat gttgcttcatcatcagtagttccagatgatgctggagcacctgagagagaagaaggggaa ttgatggagtctgaggttcctgccggtgagaatgtacatggtagtatggcgatgccagaa actggtgtctcttctgatgattctaaagttacagagaaaggttgtagcacagtaggatta gatgttacctcagactctggtcttcaaaagaggaacgtcaacctgatttcagaaggcagt ggtaaagatggtgcgtctatagatggtccgcaagagcagggtttaactgtgaagcagaga gaaacgaaaggagttgaagcaaggcatgcaatcaagtgcgcaaataccactgtcaaaaga aagtgggatcaacagaaagagaccatgttgggaaagaaacgcaacaggcagactatgttt ctcaaccccgaagatgtcaagcaagctggccctattaagaccacaacacctagaagacag aatttcccacagcctgttgtcacacgcactgttagagaatctcgcgcaggtgctgagcaa ggaacgtctgaacagaagtcagaatctaatggggaatcacaacccggattggttgctaaa actaggcggatgaacggggatgcaggaccttcttcagaggggacaacgacatctgtgtca aggcagggttcatggaagcaaccaacatattcacagtcgaagcctggtcagtcgtcaagt agacaagtctccttgcgcagtcaaagttctgcagactcaaagttcggaaacaagaagctt acttcgttcaagaagccagtcacaaatagtactcaataccaagatacgtctgtggagcgt cttatacgagaggtgaccaacgaaaagttctggcatcatccagaggatactgagctccag tgtgttcctgagcggtttgaatccatggatgagtatgttagagtgtttgaacctttactt tttgaggagtgccgggcacagctttacagttcatgggaagaatcatgcgaggcaaattca tacatgaaggtcagaataaagttcgtggaacgaagagagcgaggttggtatgatgtgata cttaattcactaaatgaatgtaaatggccttttaaggagggtgatgttgcagttctgtca actcctgtgcctgaatcagaaggagagcatgaggatggtggacgtgtagctggtacagtt aggagatatatacctgttgatactcgagatccccatggagcgattctccatttctatgtt ggagactcttatgactccggcagcaatgttgatgataatcatattttacgaaagcttaaa cctaaggagatctggcatctgacagtgcttggttcgcttgcaaccacacagagggaatat gttgctttgcatgcatttggtcagcttaacccacagatgcaaaatgcaattctcagaccc agccccgagcagtttcctaattacggtgagcaaactcctacagtacccgattgttttact ccgagctttgctggccatttgcatagaagctttaatgctccacagttggctgcaatccat tgggctgcaatgcacactgcagctggtaccagcagtggggctaagaggcaagatccatgg ccatttactcttgtccaaggccctcctggaacaggcaagacacacaccgtgtggggaatg ttgaatgtcatccatttggttcagtatcagcagtattacacttccttgctgaagaaatta gctcctgaaagttataaacaagttaatgagggcagttcagataatattgtgtcggggtct attgacgaagtcctacaaaacatggatcagaacctattccgtactctgccaaaactgtgt gcgaaaccaaggatgctcgtttgtgctccttcgaatgctgcgaccgatgaacttctctca cgtgtccttgatcgtggttttattgatggggaaatgagggtttatcgacctgatgttgct cgagtaggtgttgatactcaaactagagctgctcaagcagtctctgtggagcgaagaagt gatcagctattagccaagtcccgtgatgaaattctaggacacatgcacaacctcaggtta cgagaagctcagctctctcaagaaattgctggacttaaaagggaacttactgctgcggcc tttactaatcgttcgcagggatccgttggtgttgaccctgatgttcttatggttagagac cagaccagagatgcattgttacagcgcctttctgctgtggtggaagccagagataaagat cttgttgaaatgtctcgccttctaattgttgaggggaagtttcgcgctggtaacagtttt aacctcgaagaagctcgcgcaagtcttgaggcgagtttcgctaacgaggctgaaattgtt tttacaaccgtatcaagcagtggtcgtaaactgttttctcgtcttacacatggcttcgat atggtggtcatcgacgaggctgcccaagctagtgaagttggagttcttcctccacttgct cttggtgctgcaagatgtgtacttgttggtgatcctcagcagcttcctgctacagttatc agcaaagctgctggaaccctgttatacagcagaagtctctttgaaaggtttcagttagca ggctgcccaactttgttgctaactcttcagtataggatgcatcctcagattcgtgatttc ccttcacgatatttctaccaaggacgcctcactgacagtgaaagtgttaccactgctcct gacgagatttactacaaagattctgtcctcaagccttaccttttctttaacatcagtcat ggacgagaatcccatagaggtggatcagtttcttacgagaacattgatgaagctcgcttc tgtgttggactttacatgcatcttcagagaactctcaagtcattgggtgggggtaaagtc tctgttggggtgataactccatataaactgcagctaaaatgcctgaaaatggagtttgga aacgctttgggaccagatgaagtgaaagagatttatattaataccgtagacgcgtttcag ggtcaagaacgtgatgtcataatcatgtcatgtgtgcgtgcttccagtcacggggttggg ttcgttgctgatatacgacggatgaatgttgctctcacacgtgccaaaagagctctatgg gtgatgggaaacgcatctgctctgatgaagtgtgaggattgggcagcactgatcacggac gcccgagaaaggaactgttttatggagatggagtctcttcccaaggattttcctgtacct agctttatccctaaagcgcctaatgctaggggttttaggccaggtgggtcaaggaccaga tccatcgatatgctgcacaatgagacaaggtcagggacaccatcagaagacgacgagagg cagcagcagcagcttagcacaaggatgacgacgtttccaagaaatggtaattttcgaagg gagaattcagtagttgatgattctgatcagtcttggcaacatgggacgatccagaggagg caaaattttggacggccttttgggagaagagactaa

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