Brassica napus (rape): 106410321 Help Entry 106410321         CDS       T04128                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism bna  Brassica napus (rape) Brite KEGG Orthology (KO) [BR:bna00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bna03021]     106410321    03036 Chromosome and associated proteins [BR:bna03036]     106410321 Transcription machinery [BR:bna03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      106410321 Chromosome and associated proteins [BR:bna03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      106410321     SLIK complex      106410321 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 Motif Other DBs NCBI-GeneID:  106410321 NCBI-ProteinID:  XP_013706270 LinkDB All DBs Position C9:complement(7536139..7546966) Genome browser AA seq 1689 aa AA seqDB search MAFFRNYSNDTVSPSALDDNQDAATFQSSSPLHQDMDATYTERGFDMNMDIQYQCEAEPG SSIGQQNQTGAAVPSGRRTGVSGKWGSTFWKDCQPMGQRDGSGSAKHSLSGYKHSEDYLS NGEKLDSENENDEDIAMNKQQSGQADIPAEEMLSDEYYEQDEDSQSDHVQYKAFGDPINS RSLPKTGSSIHSKSRTSRAIQKNIHYGDADIDYEEEEDEDDPEDADFEPYDAASGGDASK KHDQDWDVSDEDPDSDDDFDLPDSEDDYDTKKPKARQQGKGFRKLSSGLDRKSAQASSRQ KRKPSYQEDFSEDDSDNEIDEGFRSMPRRGTILGKNNGRSTNNIGQSSEVRSSTRSVRKV SYVESEDSEEIDDGRNRKTQKDDIEEEDCDAIEKVLWHQPKGMSGDAHTNKKLTVPVLLS QLFDTQPDWNETEFLIKWKGQSHLHCQWKSLSDLQNLSGFKKVLNYTKKVTEEIRYRTAL SREEIEVSDVSKEMDVDIIKQNCQVERIIADRISKDDLGDVVPEYLVKWQGLSYAEATWE KDVDIAFAQAAIDEYKAREVSIAVQGKMVEQQRTKGKASLRKLEEQPEWLSGGTLRDYQL QGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWA KEFRKWLPDMNIIVYVGTRASREVCQQYEFYNEKNVGRPIKFNALLTTYEVVLKDKAVLS KIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPAK FKNKDEFVQNYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPL QKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNTK LDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTK AELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAH RIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGANFDK NELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEKDAGESEHELLGVFK VANFCNAEDDGSFWSRWIKPESVVTADEALAPRAARNTKSYVDHDRSQPDRTSKRKKKGS EPPDRSQKRRKTEYFVPSTPILEGTTAQVRGWSYGNLPKRDAQRFYRTVMKFGNHNQIAC IAEEVGGVVEAAPEEAQVELFDALIDGCRESVETEDFESKGPVLDFFGVPVKANELLKRV EGLQLLSKRISRYDDPITQFRVLSYLKPSNWSKGCGWNQIDDARLLLGILYHGFGNWEKI RLDESLGLTKKIAPVELQHHETFLPRAPNLKERATALLEMELSAAGGKNTNAKASRKNSK KVVINQLKAPARDRKGKSGPANLITTKDVGPRRTQKAEPLLVKEEGEMSDDEEVYEQFKE QKWMEWCEDVLAGEIKTLERLQRLQTISADLPKEKVLFKIRRYLQILGRRIDEVVLEHEE DSYKQDRMTMRLWNYVSTFSNLSGDRLNQIYSKLKQEREEEEGVGPSHLNGSTAGRRQQR FKTPGPPQVHKGIDTAKFEAWKRRKRTENNDVHQSERPLISNNSNSLGILGPAPSDRSHR ARQAGFPPR NT seq 5070 nt NT seq  +upstreamnt  +downstreamnt atggctttctttaggaactactctaacgatactgtatcgcctagtgctctcgatgacaat caggacgctgctactttccagagttcttcacctttacatcaagatatggatgctacttat accgaaagaggctttgacatgaacatggacattcagtatcaatgcgaagcagagccggga tctagtattgggcagcaaaaccagacgggggcagctgttccttcgggaaggaggacgggt gtatctgggaagtggggttccaccttttggaaagactgtcagccaatgggacagagagac ggctctggttctgccaaacattcactttctggttacaaacattctgaagattatctatcg aacggtgaaaaattagattctgaaaatgaaaatgacgaggatattgcaatgaacaagcag caaagtggtcaagctgatattccagctgaggaaatgctctctgatgaatattacgaacaa gatgaagatagtcaaagtgaccatgtccagtacaaagcgtttggcgatcctataaattct agatcactgcccaagacgggatcttctatccatagcaagtcaaggacctcgagagcaatt caaaaaaatattcactacggtgatgctgatatagactatgaagaggaggaagatgaggat gaccctgaagacgctgactttgagccctacgatgctgcttctggtggtgatgcaagcaag aagcatgaccaagattgggacgtttctgatgaagatcctgacagtgatgatgatttcgat cttcccgattccgaggatgactacgacacaaaaaagcctaaggctagacaacaaggtaaa ggtttccggaagttgagctctggactcgataggaaatcagcccaggcttctagtcgtcaa aagaggaaaccatcatatcaagaggacttctcagaggatgattctgacaatgaaattgac gagggttttagaagcatgcccagaagagggacaattctagggaaaaacaatggaaggtct acaaataatataggacagagtagtgaagttcggagctccaccagatcagttcgaaaagtg tcttatgtggagagcgaggacagtgaagaaatagatgatgggagaaatcgaaaaactcag aaggatgacattgaagaggaggattgtgatgctattgaaaaagtgctttggcatcagcca aagggcatgagtggagatgctcacacgaacaaaaaattaacagttcccgtgctactaagc caactttttgatactcaaccagattggaatgaaacggaattcctaataaaatggaaaggt caatctcatttgcattgtcagtggaagtcattgagcgatctccagaatcttagtggcttc aagaaggtacttaactacacaaagaaagtgactgaggagattaggtacaggacagcactc tcacgagaggagattgaggtcagtgatgtgagcaaagaaatggatgtggacatcattaag cagaattgtcaggtagaaagaataattgcagatcgaattagcaaagatgatttaggtgac gtggtgccagagtatcttgtaaagtggcaagggctttcttatgctgaagctacttgggag aaggatgtcgatatagcatttgcacaggctgctatcgatgagtacaaggctcgtgaagtt tcaattgcagtgcaaggaaaaatggtggaacagcagcgtacaaaagggaaagcaagtctc cggaagcttgaggagcagcctgagtggctaagcggaggtacgctacgggactatcagctg cagggtttgaattttcttgtcaacagctggcttaatgacactaatgtcattttggctgac gaaatgggtcttggtaagactgttcagtccgtttcaatgcttgggtttttgcagaatacc caacaaataccaggtccttttcttgtcgttgtgcctttgtcaacattagctaattgggct aaagaattcagaaagtggcttcctgacatgaatataatagtatatgttggcacccgggca agtcgagaggtttgtcagcaatacgaattttacaatgaaaagaatgttggccggcccata aaattcaatgctctgttgaccacctatgaggtggttcttaaggataaagctgttctctcc aagattaagtggatttacttgatggtggatgaagcacatagactgaaaaatagtgaggca cagctgtacacggcccttttggaatttagcacgaagaataaattgcttattactggtact ccactacagaatagtgtcgaagagctatgggctctgctccacttccttgatcctgccaag tttaagaataaggatgagtttgttcaaaactacaagaatcttagctcatttaatgaatct gagctcgccaatctccatttagaattgagacctcatattctacgaagagtgatcaaggat gttgaaaagtctctgcctccaaaaattgagcgtatactaagagtggagatgtcccctctt cagaaacagtactacaagtggatactggagcgcaacttccatgatttaaataaaggggtg cgcggtaatcaggtttcacttttaaacatcgtggtggagttgaagaagtgctgcaatcat cctttcttatttgaaagtgcagaccatggatatggtggtgacattaatgataacactaaa ctggataagattatcctaagcagcggaaagctggttatcctagataagctgctggttaga ctgcgtgagactaagcatcgcgtgcttattttttcgcagatggtaagaatgttagatatc ctggcagaatacctctctcttagaggtttccagttccagagactggatggtagtaccaag gcagaacttcgtcagcaagcaatggatcattttaatgctcctgctagtgacgacttctgt tttcttctttcgacccgagctggtggtctgggaatcaatcttgctactgctgatacggtc gttatatttgactctgactggaatccacagaacgatctgcaggcgatgagtcgagcgcac agaattgggcaacaagaagttgtgaacatttatagatttgtcacgagtaaaagtgttgag gaagagatcctagagcgcgccaaaagaaaaatggttcttgatcatttggttattcaaaaa ctaaatgcggagggtaggttggagaagcgggaaactaaaaagggagctaactttgacaag aacgagctttctgcaatattaagatttggagcggaagaactttttaaagaggataaaaat gatgaagaaagcaaaaagcggctgttaagtatggatattgacgaaatcctagagagggca gagcaagtagaggaaaaggatgctggcgaatcagagcatgaactgttgggtgttttcaag gttgctaacttttgtaacgctgaagatgatgggtccttttggagtcgttggataaaacct gaatctgtggtcacagctgacgaagctcttgcaccacgggctgctaggaatacgaagagt tatgtggatcatgataggagccaacctgacaggaccagtaaaagaaaaaagaaaggatct gaacctccagatagaagtcaaaagcgcagaaaaactgaatattttgttccctcaactcca atattagaggggactacagctcaagttagaggctggtcctatggaaatctccctaagaga gatgcacaacgattttatcgaactgtcatgaagtttggtaaccataatcaaattgcatgt attgcggaagaggtgggtggtgttgttgaagcagccccggaggaagcacaggttgagcta tttgatgctttaattgacggttgtcgggaatctgttgaaacagaagactttgaatcaaag ggtcctgtgttggatttctttggtgtgccagtaaaagcaaacgaactgttgaaacgtgtg gaaggactccagctcttatcaaagcgtattagtcgatatgacgatccaattacacaattc cgggtgttgtcctaccttaaaccttcaaattggtccaagggttgcggttggaatcagatt gatgatgcgagattgcttctggggatactttatcatggttttgggaactgggagaagata agattagatgagagccttggacttacaaagaagattgctccagttgaacttcaacaccat gagacttttttacctcgtgctccaaacctaaaggagcgtgctactgctcttcttgaaatg gaactttctgcggcaggagggaaaaacacaaatgccaaagcatcacgtaaaaattcaaaa aaggttgtcatcaatcaattgaaagcacctgcaagagaccgaaaagggaaatctggtcct gccaatctaataacaacaaaagatgttggacctcggagaacccaaaaagctgagccgcta ctggtgaaggaagagggagaaatgtctgatgatgaggaagtttacgagcagtttaaggag cagaaatggatggaatggtgtgaggatgtattggctggtgaaatcaaaacacttgaacgt ctacaaagattgcaaacaattagtgcggatctgccaaaggagaaggtgcttttcaaaatc cggagatatttgcaaatccttgggaggagaatagatgaagttgttttagaacacgaagag gattcgtacaagcaagatagaatgacaatgagattgtggaactatgtttcaactttctca aacctatcgggggatcgactcaatcagatctactccaaattgaagcaggagagagaggaa gaagaaggggttggaccatcgcatctcaatggctcaacagccggtaggaggcaacaaaga ttcaaaacaccaggacctccgcaagttcacaagggcattgacacagcaaaatttgaagca tggaaaaggagaaaaagaacagaaaataatgatgttcatcaatctgagcgaccactgata agcaacaactctaactcactgggaatactgggccctgcaccatctgatagaagccatcgg gcacgccaagctggatttccgccaagataa

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