KEGG   Brassica napus (rape): 106410356
Entry
106410356         CDS       T04128                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X2
  KO
K14005  protein transport protein SEC31
Organism
bna  Brassica napus (rape)
Pathway
bna04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106410356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106410356
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bna02044]
    106410356
Membrane trafficking [BR:bna04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106410356
Secretion system [BR:bna02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   106410356
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 WDR55 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_EML Beta-prop_DCAF4 MIOS_WD40 SRA1 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 106410356
NCBI-ProteinID: XP_013706303
UniProt: A0A816QHT4
LinkDB
Position
C6:complement(30372182..30378556)
AA seq 1105 aa
MACIKGVDRSASVALAPDAPYIAAGTMAGAVDLSFSSSASLEIFKLDFQSDDRDLPLVGE
IPCSERFHRLAWGRNGSGSDEFSLGLIAGGLGDGNIDLWNPLSLTSSQSGVNALVGHLSV
HKGPVRGLEFNAITPNLLASGADDGEICIWDLTKPSEPSHFPLLKGSGSSTQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPLINFADSVRRRCSVLQWNPDIATQIMVASDDDS
SPTLKLWDMRNTMSPVREFTGHQKGVIAMEWCPNDSSYLLTCAKDNRTICWDTNTGEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEDNTFGTAYLKAPKWY
KRPVGASFGFGGKLVSFQSKAPPKGASCITSEVFLHSLVTEQSLVSRTSEFEAAIENGDK
TSLRGLCEKKSEETESEEEKETWGLLKMMFDEEGTTRTKLISHLGFSLPSVEQDQAVNGL
SSDLNGVELEDTAVHAREPEESNEAAAFAMDNGEDFFNNFPAKPDTPVSTSATDFMPPDT
DFTAKEEETEEMPEEEDESSDRVFDDAIQRALVVGDYKEAVDQCISANKMADALVIAHVG
GTALWESTREKYLKMSSAPFMKVVSAMVNNDLTSLVHTRSHKYWKETLALLCTFAQGEQW
SSLCDVLASKLMAAGNTLAAVLCYICAGNVDRTVEIWSRSLSNERDGRSYAELLQDLMEK
TLVLALATGNKKFSASLCKLFESYAEILASQGLLSTAMKYLKVLDSGGLSPELSILRDRI
SLSAEPETSTVASGNTQLPSTIPYNQEPTQAQPNVLSNPYDNQYQQPYTNSYGGYGPTAV
NPPMQQATMFMPHQAQPTPQPSYPPAPASNAQQSMRSTFVPSTPAALKNANQYQQPTIAS
HSFTGPSNNAYPVPPGPGSYVPSAPSQVGQYSNPMMSQVAAPGAGPVGFTPMSTPGVAPR
SVIGSVQPASPPAPQAAPAPAAPPPTVQTADTSNVPAHQKPVVATLTRLFNETSEALGGA
RANPPKKREIEDNSKKLGALFVKLNSGEMAKSAADKLGQLCQALDNHDFSTALQIQVLLT
NSEWDECNFWLSALKRMIKTRQNVR
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtggacagatccgcctccgtcgcgcttgctcccgacgctcct
tacattgccgccggaaccatggcgggagccgtggatctgtcgtttagctcttccgccagt
ctggagatcttcaagctcgattttcagtcagacgatcgcgatttgccgctggttggggag
atcccctgctcggagcgattccatagactcgcgtgggggagaaacggatctggatccgat
gagttctccctcggtctcattgccggcggccttggcgatgggaatatagatctgtggaat
ccgctttctttaaccagttcccagtccggcgtaaatgcactcgttggacatctttcagtt
cacaaaggccccgttcgtggtcttgagtttaatgctatcaccccaaatctacttgcctct
ggggctgatgatggggaaatttgcatttgggatctaactaagccttctgagccttctcat
tttccccttctcaagggcagtggttcttccacgcaaggtgaaatctcctttatatcgtgg
aatagaaaagttcaacagatattggcatctacctcatacaatgggactactgtaatatgg
gacttgaggaagcagaagcctttgattaactttgcagattcagttcgacgccggtgctct
gttttacaatggaaccctgacattgctactcagatcatggttgcatccgatgacgacagt
tcacctactctgaagctctgggatatgaggaatacaatgtcacctgtgcgcgagtttact
ggacaccaaaaaggtgtgattgcaatggagtggtgtccaaatgatagctcatatcttctt
acctgtgctaaggacaaccgaactatttgctgggacactaatacaggagagattgtggct
gagttacctgctggcaacaattggaattttgatgttcattggtacccaaagatacctgga
gttatatcagcatcgtcatttgatgggaaaattggcatctacaacatcgagggttgcagc
cgctatggtgctgaagacaatacttttggtactgcttatttaaaagcaccgaaatggtat
aagcgcccggttggtgcatcttttggatttgggggaaagctagtatcgtttcagtcaaag
gcccctccgaagggtgcctcatgcattacgtctgaggttttcttgcacagcctggtaaca
gaacagagtttagtgagtcgtacttctgaatttgaagccgccatagaaaacggagataag
acttctctaaggggtttgtgtgagaagaaatctgaagagactgaatccgaagaagagaaa
gagacatggggcttgctgaaaatgatgtttgatgaggaaggaactacaaggacaaagttg
atcagccacctcggctttagtttaccttctgtagaacaggatcaggctgtaaatgggctc
tcttcagatctgaatggcgtcgaattagaggatactgcagtgcatgcacgggagcctgag
gaaagtaacgaggcagctgcatttgctatggacaatggagaagacttcttcaacaacttt
cctgctaaaccggatactcccgtatctacctctgccacagattttatgccccctgacaca
gattttactgccaaagaagaagaaactgaagaaatgccagaagaagaagatgaaagttct
gaccgtgtatttgatgatgccatccagcgtgctttggttgttggagattacaaggaagcg
gtggatcagtgtatatctgcaaataagatggctgatgctttagttattgctcatgttggt
ggtacagcgttgtgggagagtactcgtgagaaatatttgaagatgagcagtgcacctttc
atgaaggttgtttctgcaatggtgaacaacgatctcaccagccttgtccatacaaggtca
cacaagtactggaaagaaactcttgctctcctatgcacttttgcacaaggagaacaatgg
agcagcctgtgcgatgtccttgcctcaaagttgatggctgctggtaacactttggctgca
gttctgtgttacatttgcgcaggcaatgttgacagaacagtagaaatttggtcgaggagc
ctttcaaacgagcgtgatggaagatcttatgccgagcttcttcaagatcttatggagaag
actcttgtccttgctttggcaactggcaacaaaaagttcagcgcatccctgtgtaaactc
tttgagagttatgcggagatattggccagccaagggcttctttcaacggcaatgaagtac
ttaaaagttctggattctggtggcttgtcacctgaactttctatattacgtgatcgcatt
tctctttctgcagaacctgagacaagcactgtagcttcaggcaacactcagcttccaagc
accataccatataaccaggagccaactcaggcgcaaccaaacgtccttagtaacccatat
gataatcagtatcaacaaccatacactaattcttatggcggatatggccccacagctgta
aatccacccatgcagcaagcaaccatgtttatgcctcaccaagctcagccaactccgcag
ccatcttatcctccggctcctgcaagcaatgctcagcaatccatgagatctacttttgtg
ccttcaactcccgctgcactgaagaatgcaaaccaatatcagcagccaaccattgcttcc
cattcattcaccggaccatctaacaatgcataccctgttcctcctggtcctggttcatat
gtaccttctgccccttcgcaagttgggcaatattctaaccccatgatgtcccaagtcgct
gctccaggagctggacccgtaggatttacgcctatgtcaactccaggagttgctccaaga
tctgtaataggttctgtgcaaccagcaagtcctccagcaccgcaggcagcccctgcgcct
gcagctccgccaccaactgttcagactgcagatacttccaacgtcccagcccaccagaaa
cctgtggtagcaacgttgacaaggcttttcaatgagacatcggaagcactgggaggcgca
cgtgcaaatcctcctaagaagcgtgagatagaagacaattcaaaaaaattaggggcttta
tttgtgaaactcaatagcggagagatggccaagagtgccgcagacaaactcggacagctc
tgccaagctctggacaaccatgacttcagtaccgcccttcagatacaggtacttctgacg
aacagcgaatgggatgagtgcaacttctggctgtcggcattaaagcggatgatcaagacc
aggcaaaatgtgcggtga

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