KEGG   Brassica napus (rape): 106410552
Entry
106410552         CDS       T04128                                 
Name
(RefSeq) uncharacterized protein LOC106410552
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
bna  Brassica napus (rape)
Pathway
bna03022  Basal transcription factors
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106410552
  09124 Replication and repair
   03420 Nucleotide excision repair
    106410552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106410552
   03400 DNA repair and recombination proteins [BR:bna03400]
    106410552
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     106410552
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     106410552
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 106410552
NCBI-ProteinID: XP_022561863
LinkDB
Position
C7:52189073..52190413
AA seq 184 aa
MVMVSNSSHHNKEINVRRRISAIYNKREEDFSALKDYNDYLEEVECMIFDLVDGINVGAI
EDKIKRYSQENAEQIMVNRARKAEDLTAALAACKAQPPQTDTVTSSNHGTTAATAYIQAP
RPTGMGPQPVPIGGGGRADHQRYYSVEDEAMLRIKAERAPRAGGFSLEISKKRAFEEAFS
CIWV
NT seq 555 nt   +upstreamnt  +downstreamnt
atggtgatggtgtctaactctagccatcacaacaaggaaataaacgtcagaaggaggatc
tctgcgatatacaataagcgggaagaggatttttcagcgcttaaggactacaatgactac
ttggaagaagtggagtgcatgatatttgatttggtagatggaatcaatgttggggccatt
gaggacaagattaagagatactctcaagagaatgctgaacagatcatggttaatcgcgcc
cgcaaggctgaggatttaactgcagccttggcagcttgcaaggcccaacctccacaaact
gatactgttacgtcttcaaaccatggaactacggctgcaactgcatacattcaggctcca
cgaccaacgggaatgggcccacaacctgtacctataggaggaggaggaagagcagatcat
caacgttactactctgtggaagacgaagcaatgttgaggatcaaagcggagagagctcca
cgcgctggaggattttctttagagataagcaagaagagggcttttgaagaagcattttca
tgcatttgggtttga

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