Brassica napus (rape): 106410692
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Entry
106410692 CDS
T04128
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106410692
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106410692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DUF4585
Motif
Other DBs
NCBI-GeneID:
106410692
NCBI-ProteinID:
XP_013706701
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All DBs
Position
C7:35280935..35287425
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AA seq
1339 aa
AA seq
DB search
MASASQYMMEDQTDDEDFFDKLVDDSYSPSQAQAQAQASSSAKQLTFDDGSDSDDVRAFS
NLSVANGSVGDGDGTLKEADPGNDVAKEGSSKEEPSSEEDVVHSDANKLSDDVVRSEVDD
VPLSETAKESKVVNEPGTHGVKEIDWGAFAADSSVNDGRGFGSYSDFFTEFDGQLQGKAE
VDVVAGGNLAASNDTNNTSVVASAGFEQHQGEMLQDSTSGQYVDNSQSWENMYPGWKYDA
NTGQWYQVDASINSQGSYGNSANNWEAVASTDDSTSAVAGTAWNQVSQVVNGYPEHMVFD
AQYPGWYYDTIAQEWRSLDSYNQASQTAGAGQALDQQVQNGHSLTAMYHSNTENSMYNVN
DTKQTFKGQEFGIQSQQGSWDQSYYANNQQATKAWQSENGGQAEAAASLPNFGGNQQVNN
LYRTGSVAEQFKPNEIGVQGFIPQHMNVASVTQNGPLSFSNDFYNGQQQYVDDVQSFQSN
QLFSPSAGRSPDGRPPHALVNFGFGGKLIVVKDDNGSLQNSSFGSQKGTGGSYISLLNLA
EVISGSASYSSAGDNSLSYFSCLNQQSLPGPLVGGNVGNKDLHKWLDERIMNCESSDMDF
SRGKLLKMLLSLLRISCQYYGKLRSPFGTDTTQKETDSAEAAVAKLFAFAKKDAVQNGYA
PFSQCLQQLPPESQLQATASEVQNLLASGRKMEALQCAQEGHLWGPALVIAAQLGQQFYG
DTVKQMALRQLVPGSPLRTLCLLVAGQPAEVFSTGSTGDLSFPGSPQQQAQFGSSSMLDN
WEENLGVITANRTTDDELVITHLGDCMWKERGEIIAAHICYLIADKNFDQYSDSARLCLV
GGDHWKYPRTYASPEAIQRTELYEYSKTLGNSQFILLPFQPYKVIYAHMLAEVGKLSAAQ
KYCQAVLKCLKTGRSPEADTWKQCVSSLEERIRIHQQGGYTANLAPTKLVGRLLNLFDST
ANRVVGGMPPPAPHSTTGSLQAKEYHQQQQEATKLPYSQSVNTMSSLMPPASMESLHESG
GTGRRTAVHTRSVSEPDFGRTPIQDLADSPKEKVEGVTKLKSSGSVAGSRFSRFGFGMLK
DTVGRVLQARSSSKEAKLGAENQFYYDDKLKRWVEKGVEPPAEEAALPPPPKLGTYKNNS
LGYENKSDMNQPSGNWSSGGPTPAENSSGIPPVSQSSNQFSARGRMGVRARYVDTFNQGR
GNSQTMFHSSSMPSPKPPIPAKAKFFIPATPASSSNGHATEPAASETRQEENSGDEVAAS
SGAPPQMTMQRFPSMNNIQMNGLGISANGDHHPPPASRRTASWSGNFNTSFTSPTSPSTF
KPVLLNGSSIVEELQEVEL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcttctcaatacatgatggaggatcaaacggacgacgaggatttcttcgac
aaacttgttgatgattcctattctcccagccaagctcaggctcaggctcaggcttcatct
tctgctaagcagctgacattcgacgacggtagtgactcagatgacgtcagagctttttcg
aatctctctgttgctaacggttctgtgggtgatggagatggaacattgaaggaagcagac
ccggggaacgatgttgcaaaggaaggctcaagtaaagaagagccttcatcggaagaagat
gtcgtccacagtgatgcaaataagttaagtgatgatgtggtgagatcggaggtggatgat
gtgccactgtctgaaacagctaaagaaagcaaggtagttaatgagcccgggactcatggg
gttaaggagattgattggggtgcgtttgctgcagattcttcagtaaatgacggtcgtggg
tttggttcttactctgatttcttcactgagtttgacggacagttacaaggaaaggcggag
gttgatgtggtcgctggaggaaacttagcagcatctaacgatacgaacaacacaagcgtt
gttgcctcggcaggtttcgagcaacatcagggtgaaatgcttcaggattctacaagtggg
cagtacgtggataatagtcaatcttgggaaaatatgtatcctggatggaaatatgatgca
aatactggccaatggtatcaagttgatgcaagcattaattcacaggggagctacggaaac
tcagcaaataactgggaagccgttgcttctactgatgactcaacatctgcagtggctggt
acagcttggaaccaggtttcacaagtggtcaatggatatccagaacacatggtctttgac
gcgcagtatccagggtggtactatgacacaatcgctcaagaatggcgttccctggacagc
tacaaccaggcttctcaaacagctggagctggtcaagctcttgatcagcaagttcagaat
ggtcattctcttacagccatgtatcacagtaatactgagaatagcatgtataatgtgaat
gatacaaaacaaacattcaaaggccaagaatttggtatacagagccaacaaggaagctgg
gaccaatcttactatgccaacaatcagcaggctacgaaagcatggcaatcagaaaatgga
ggtcaggctgaggcggctgcctcgttaccaaacttcggaggaaaccagcaagtaaataat
ttgtacaggacaggatctgtggctgaacagtttaagccaaatgagattggagttcaaggc
ttcatccctcagcatatgaatgtggctagtgtcacgcaaaatggaccactgagtttctca
aacgatttctataatggacagcagcaatacgtagatgacgttcagtcatttcagagcaat
cagcttttctctccaagtgcaggaagatcacctgatgggcgtccaccacatgcacttgtc
aattttggatttggaggaaagctcattgttgtgaaggatgataatggctcactccagaat
tcatcgtttgggagtcagaaaggaactggtggaagctatatctctctcttaaacttggca
gaagttattagtgggagtgcctcttattcaagtgctggggacaactcgttgagttacttc
agttgtctgaatcaacaatctcttccaggtcccttggttggagggaatgttggaaataaa
gacttgcataagtggcttgatgagagaattatgaattgtgaatcttccgatatggacttt
tcaagagggaagcttttgaagatgcttctttctttgctcagaatatcttgtcagtattat
gggaaactccggtctccttttggaactgatacaacgcagaaggaaacggattctgccgag
gcagcagtcgctaaactttttgcatttgccaagaaagatgccgtgcaaaatggttatgct
ccttttagccagtgcttgcagcaattaccacctgaatcacaactccaagcaactgcttca
gaggtgcagaatcttctggcttctggtaggaaaatggaagctctccaatgtgcacaagaa
ggtcatttgtggggaccagcacttgttattgcggcacaacttggccaacagttctatggt
gacactgtcaaacaaatggcccttcgccaactcgtacctgggtctcccttacggacattg
tgcctgctggttgcagggcaacccgctgaagtgttctccactggaagtacaggcgatctc
agctttcctggttcgcctcaacagcaagcccagtttggaagtagcagcatgcttgacaat
tgggaagaaaatctgggtgtaataacggccaacaggaccacagatgatgaacttgtgata
actcatcttggagattgcatgtggaaagaaagaggcgagataattgcagcgcatatttgc
tatttgatcgcggataagaactttgatcaatactcagatagtgccagactttgtcttgtc
ggaggggaccactggaaatatcctcgaacatacgcaagtccagaggctatccagagaaca
gagttgtatgaatactctaagacgctgggaaactctcagtttatcctgttaccttttcaa
ccatataaagtcatatatgcccatatgctggctgaagttggtaaactttcagctgcacag
aagtactgtcaagcagtattaaagtgcctcaaaactggccgatctcctgaagcggacacg
tggaaacagtgtgtttcgtcactagaagagagaatccgtatccaccaacagggtggatat
actgcgaatttggccccaacaaagcttgttggaagactgctaaacctttttgatagcacg
gcaaatcgtgttgttgggggcatgccaccacctgcaccacattcaacaacaggaagcctt
caggcaaaagagtatcatcagcaacagcaggaagccactaagttaccatatagtcaatcg
gtgaatacaatgtcatcactgatgccacccgcttcaatggaatccttacatgagtccggt
ggtaccgggaggagaacggcagtccatactagaagtgtatcggagccagatttcggtaga
acgccaatacaggatctagctgactcgccaaaagaaaaggttgaaggggtgacaaagttg
aaatcatctgggagtgtggcaggttcccggtttagtagatttggttttggcatgctgaag
gacacggtagggagggtcttacaagctcggtcatcatcgaaagaggcaaaattgggcgca
gaaaatcaattctactatgatgataaactaaagagatgggttgagaaaggtgtggaaccc
ccagccgaggaagctgcactgcctcctcctccaaaattaggcacttacaaaaacaactca
ttgggttatgaaaacaaatctgacatgaaccaacctagtggaaactggagttctggtggg
ccaactccggcagagaattcttcaggaatcccaccagtctcacagagttcgaatcaattc
tcagctcgtggacgtatgggtgtgcgtgcaagatacgttgacacctttaatcaaggtcgt
ggaaactctcagacaatgtttcattcatcttccatgccatcccctaaaccaccaatccct
gcaaaagcaaaattcttcatcccagcaacacctgcatcgtcttcaaacggccatgcaacg
gaaccggctgcttctgaaacaagacaggaggagaattctggagatgaagtagcagcatct
tcaggggctccaccacaaatgacgatgcagagatttccaagtatgaacaacatccaaatg
aatggattgggaataagcgccaatggggatcatcatcctcctcctgcttccagaagaaca
gcttcatggagcggaaacttcaacacctcgtttacgtctccaactagtccatcaactttc
aaaccagtcttactaaacggtagcagcatagtagaggagcttcaggaagtggaactttaa
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integrated database retrieval system
