Brassica napus (rape): 106410705
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Entry
106410705 CDS
T04128
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106410705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106410705
03029 Mitochondrial biogenesis [BR:
bna03029
]
106410705
Membrane trafficking [BR:
bna04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
106410705
Mitophagy
Scaffold proteins
106410705
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106410705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
FliD_C
Ecotin
DUF8156
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
106410705
NCBI-ProteinID:
XP_013706722
LinkDB
All DBs
Position
C7:complement(52172321..52177129)
Genome browser
AA seq
1076 aa
AA seq
DB search
MSGSFTDEGRLILCVAENGHSFAFECNETTSVESVMRFVESVSCISLSDQLLLSLDMKLE
PQKLLSSFGLPASDREVFVFNKAMLQSNSHPPSPEDVDLQEIVDDALPPAASLHEHHPLD
DASDPALKALPSYERQFRYHFLRGRAIYDCTVLKHENCERFAREQKVQQRAVEVATRNLE
QYYRVIYQNFLEFMKLYKHQHRLHSDLLMNFGRDVEKLRSVKVHPYLQTDSRKCLLDFVK
ENKLSLAAESCGSSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMEENLEVIVKEHE
HFINEQNSIMQSLSKDVNTVKKLVDDCMSSQFSSSLRPHDAVSALGPMYEVHDRNHLPQM
QACYDSISELLEFCKNKKNEMNSFVHSYMQKITFVTYIIKDAKLQFPVFREAMVRQDDLF
ADLKLVRGVGPAYRACLAEAVRRKASMKLYMGMAGQLAEKLAMKREAEVRRREEFLKTHG
HFVPRDVLASMGLYDTPTQCDVNVSPYDTSLINIEMADVDRYAPAYLVGLQPKIASSSSS
AEAEEIGVDTNKDSFDDILEVSELVEIAGTSKMEVENAKLKAELASAISRICSLGPQVEY
EEIDESNVETLLKNAAQKTEEALQAKDEYVKHLLSMLKEKQRHYDSYEKRIRELEQRLND
EYSQGQRGVNKKDVSGGLNPMDEVSCVSNHSSKQPCKGREGMDEDMVDSSSLVLSHPLDS
SMLESQQNNEQGGKDNVVGGMGVFLSNSSTAESPTKSLDTKHSDDIILELRNELMEKSSK
LNETESKLNGAMEEVASLSRELEMNQKLLEESQMNCAHLENCLHEAREEAQTHLCAADRR
ASEYNALRVSSVKIRGLFERFRSSVCTGGGVAGFAESLRNLAQALDNSINDGEDDGTVEF
RKCIRVLADKVSFISKHREELLEKCRNLDATIEQTRKELVEKKELVKTLYTKHQLGKQAN
KEKISFGRLEVHEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPNRPTYIVGQI
VHIERQAVKQPNLASSSMSTSSSGTTTNPYGLSSGCEYFIVTIAMLPDTSIHQQAS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcttcactgatgaaggcaggcttatcctctgcgtggctgagaacggccac
tcatttgcatttgaatgcaacgagacaacttcagttgaatccgtgatgcgtttcgttgag
tctgtctcctgtattagcctctccgaccagcttctcctctcgctggacatgaagcttgag
ccacagaagctgctttcatccttcgggcttccggcaagtgatagagaagtctttgttttc
aacaaagctatgctgcaaagcaactctcatccgccatcaccggaagatgtggatttacag
gagatagttgatgatgctttaccacctgcggcttcattgcacgagcatcaccccttggat
gatgcgtcagatccagctttaaaggccttaccttcgtacgagaggcagttcagataccat
ttccttagaggccgcgccatctacgattgcacggtcctgaagcatgagaactgcgagagg
tttgctagagagcagaaggtgcagcagcgcgcggttgaagttgctacgaggaacttggag
cagtactacagggtgatataccagaactttctcgagttcatgaagctttacaagcatcag
caccgtctccattccgatctgctgatgaatttcggaagggatgttgagaagctgaggtcg
gttaaggttcacccttaccttcaaactgattcgaggaaatgcttgctggactttgtcaag
gaaaataagttatcactggctgcggagagttgtgggagctctcacaggcagtttgagaat
aagattgcgcagttccagcagatgtttgtggaggtcaagcgcaaggtggaggagttgttt
gcttgcagggcttccttgtcgatggaggagaacttggaagtgattgttaaggagcatgaa
cacttcattaatgagcaaaatagcataatgcaatctctcagcaaagatgtcaatacggtt
aagaagcttgtggatgattgcatgtcaagccaattttcctcatctctccgacctcatgat
gccgtttcagccctgggacctatgtacgaagtgcacgacaggaatcaccttccccagatg
caggcttgctatgactccatctcagaactcctagaattttgcaaaaacaagaagaatgag
atgaacagcttcgtacacagttacatgcaaaagataacattcgtcacatacatcatcaaa
gacgctaagttacagtttcccgtttttagagaggcgatggtgcgtcaagacgacttattc
gcagacctgaagttagtccgcggtgttggccccgcttacagggcctgcctcgcggaggct
gtgaggagaaaagcctctatgaagctttacatgggcatggctgggcagttggcggagaag
cttgctatgaagagggaggcagaggtcaggagacgtgaggagtttcttaagacgcatggt
cactttgtacctcgtgatgtgttggcttctatgggtttatatgatactcccactcagtgt
gatgtcaatgtctctccttatgatactagtttgatcaatattgaaatggcagatgttgat
agatatgctcctgcgtatctagttgggttacagccaaagattgcatcctcaagtagttct
gctgaggctgaggagataggtgtagacactaacaaagatagttttgatgatatcctagag
gtctcagagttagtggagatagctggaacaagcaagatggaagttgagaacgcgaaacta
aaagctgagcttgcttctgccatctctcggatttgttcattaggtccccaagttgaatac
gaggagatagatgaaagtaacgttgaaactttgttgaaaaacgcagcacagaaaacagaa
gaggcgctgcaggccaaagatgagtatgtgaaacatctcctatctatgctgaaggagaaa
caaaggcattatgattcatatgagaagcgcatacgtgaactggaacaacgtctcaacgat
gagtattcacagggacagagaggtgttaataagaaggatgtctctggtggcttaaaccct
atggatgaggtctcatgtgtttcaaaccattctagcaagcagccatgtaaaggccgggaa
ggtatggatgaggatatggtggattcctcctctctggtgctaagccatcctcttgattca
tcgatgctggaaagccagcaaaacaatgagcaaggtgggaaggataatgtggtgggaggg
atgggtgtgtttctaagtaacagttcaacagccgagagcccaactaaatctttagatacc
aaacacagtgatgatattattttggagcttagaaatgagctgatggagaagtccagtaaa
ctgaatgagactgagtccaagctaaatggtgctatggaagaggtagcgagtctgagcaga
gagttggaaatgaatcagaagcttctcgaagaatcccagatgaactgtgcgcatttggag
aactgcttgcatgaagcaagagaagaggctcagacacatctttgtgctgctgatcgtaga
gcgtctgagtataatgcactccgtgtctcatctgtgaagatacgaggtctctttgaaaga
ttccggagctctgtctgtactgggggtggggttgctggttttgccgagtctttgcgtaat
ttggctcaagctttagacaactccattaatgacggtgaagatgatggtactgttgagttc
cggaaatgcatccgagtcctcgcagacaaagttagcttcatctctaaacaccgggaggag
ttacttgaaaagtgccggaatcttgatgctacaattgaacagacaagaaaggagttggtg
gagaagaaagagctggtgaagacattgtacactaagcaccaacttggcaagcaggcaaat
aaagaaaagatatcattcggtcgtcttgaagtccacgagatagcagcatttgtgctaaat
caagcaggacattacgaggcgatcaacaggaactgcccaaactactacttatccagtgaa
tccgaggcattgttcacagatcacctcccaaaccggcctacatacattgttggacagatt
gtccacatcgagcgtcaagcagtgaagcagccaaatttggcatcaagttcaatgtcaaca
tcatcttcaggaacaacaacaaacccttatggtctttcttcaggatgtgaatacttcata
gtgacaatagcaatgctgcctgacacctctattcatcaacaagcttcctga
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integrated database retrieval system
