KEGG   Brassica napus (rape): 106410763
Entry
106410763         CDS       T04128                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bna  Brassica napus (rape)
Pathway
bna03030  DNA replication
bna03410  Base excision repair
bna03420  Nucleotide excision repair
bna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106410763
   03410 Base excision repair
    106410763
   03420 Nucleotide excision repair
    106410763
   03430 Mismatch repair
    106410763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bna03032]
    106410763
   03036 Chromosome and associated proteins [BR:bna03036]
    106410763
   03400 DNA repair and recombination proteins [BR:bna03400]
    106410763
DNA replication proteins [BR:bna03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106410763
  DNA Replication Termination Factors
   ELG1-RFC complex
    106410763
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106410763
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106410763
  Check point factors
   HRAD17(Rad24)-RFC complex
    106410763
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Mg_chelatase RCF1-5-like_lid Rad17 Viral_helicase1 AAA_5 AAA_11 AAA_assoc_2 AAA_24 RuvB_N DNAX_ATPase_lid nSTAND3 AAA_19 AAA_25 bpMoxR AAA_28 IstB_IS21 AAA_30 AAA_7 MeaB ABC_tran AAA_18
Other DBs
NCBI-GeneID: 106410763
NCBI-ProteinID: XP_013706815
UniProt: A0A078IDT5
LinkDB
Position
C9:complement(10831145..10833174)
AA seq 414 aa
MAFLAKFNTFVQISYYSIFTSRLMKNDDIFKYRVIFGDISDNLYNMIPKSNSYHFVGPLM
QIYRPLQTRKPPNLIGGDLKMASSSSTSSGGGGYEIPWVEKYRPSKVVDIVGNEDAVSRL
QVIARDGNMPNLILAGPPGTGKTSSILALAHELLGPNYREAVLELNASDDRGIDVVRNKI
KMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSGKIIEP
IQSRCALVRFSRLSDQEILGRLMVVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATF
SGFRFVNQENVFKVCDQPHPLHVKNMVRNVLESKFDDACHGMKQLYDLGYSPTDIITTLF
RIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLAVVRETAKAA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcctttttagcaaaatttaatacttttgttcagatttcgtattattctattttcacg
agtcgtttaatgaaaaatgatgatatctttaagtatcgagttatttttggggatatttct
gataatttatataatatgatcccgaaatcgaattcttatcactttgtaggccctttaatg
caaatttatcgccccctccaaaccagaaaacccccaaatctcatcggtggagatctgaaa
atggcgtcttcgtcttcaacatcttccggcggcggaggttacgagatcccgtgggtggag
aaatacaggccgagcaaagtggtggatatcgtcggaaacgaagatgcagtctcaaggctc
caagtcatcgctcgcgacggcaacatgcccaatcttatcctcgccggtcctcctggaacg
ggtaagaccagtagcattttggctcttgcccacgagcttctcggccctaactatagagag
gctgttctcgagttgaatgcttctgatgataggggtatcgatgttgttaggaacaagatt
aagatgtttgctcagaagaaagtcacacttcctccgggtcgtcataaggttgtcattctt
gatgaagctgacagcatgacatctggagcacagcaagctttgaggagaacgattgagatc
tactcaaactctacccggtttgcacttgcttgtaacacttctggcaagattattgagcct
atccagagtagatgcgcccttgttcgattctctaggttatctgatcaggagatacttggc
cgtctcatggtcgtggttcaagctgagaatgttccttatgtacctgaaggccttgaggcg
ataatcttcacagctgatggtgatatgaggcaagctctgaacaacttgcaagctacattc
agtgggtttcgctttgtcaatcaagaaaacgtcttcaaggtctgtgaccagcctcacccg
cttcatgtcaagaacatggttcgcaatgtgttggaaagcaagtttgacgatgcttgtcac
ggcatgaagcagctatacgatctaggctactctcctaccgacattatcacaacacttttc
cgtataataaagaattatgatatggctgagtatctgaaacttgagttcatgaaagaaact
ggttttgcgcatatgagaatatgtgatggagttggatcatacctccagctatgtggtctt
cttgctaagttagccgttgttcgtgaaacagcgaaagctgcttag

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