Brassica napus (rape): 106410763
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Entry
106410763 CDS
T04128
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03410
Base excision repair
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106410763
03410 Base excision repair
106410763
03420 Nucleotide excision repair
106410763
03430 Mismatch repair
106410763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106410763
03036 Chromosome and associated proteins [BR:
bna03036
]
106410763
03400 DNA repair and recombination proteins [BR:
bna03400
]
106410763
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106410763
DNA Replication Termination Factors
ELG1-RFC complex
106410763
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106410763
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106410763
Check point factors
HRAD17(Rad24)-RFC complex
106410763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
Mg_chelatase
RCF1-5-like_lid
Rad17
Viral_helicase1
AAA_5
AAA_11
AAA_assoc_2
AAA_24
RuvB_N
DNAX_ATPase_lid
nSTAND3
AAA_19
AAA_25
bpMoxR
AAA_28
IstB_IS21
AAA_30
AAA_7
MeaB
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
106410763
NCBI-ProteinID:
XP_013706815
UniProt:
A0A078IDT5
LinkDB
All DBs
Position
C9:complement(10831145..10833174)
Genome browser
AA seq
414 aa
AA seq
DB search
MAFLAKFNTFVQISYYSIFTSRLMKNDDIFKYRVIFGDISDNLYNMIPKSNSYHFVGPLM
QIYRPLQTRKPPNLIGGDLKMASSSSTSSGGGGYEIPWVEKYRPSKVVDIVGNEDAVSRL
QVIARDGNMPNLILAGPPGTGKTSSILALAHELLGPNYREAVLELNASDDRGIDVVRNKI
KMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSGKIIEP
IQSRCALVRFSRLSDQEILGRLMVVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATF
SGFRFVNQENVFKVCDQPHPLHVKNMVRNVLESKFDDACHGMKQLYDLGYSPTDIITTLF
RIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLAVVRETAKAA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcctttttagcaaaatttaatacttttgttcagatttcgtattattctattttcacg
agtcgtttaatgaaaaatgatgatatctttaagtatcgagttatttttggggatatttct
gataatttatataatatgatcccgaaatcgaattcttatcactttgtaggccctttaatg
caaatttatcgccccctccaaaccagaaaacccccaaatctcatcggtggagatctgaaa
atggcgtcttcgtcttcaacatcttccggcggcggaggttacgagatcccgtgggtggag
aaatacaggccgagcaaagtggtggatatcgtcggaaacgaagatgcagtctcaaggctc
caagtcatcgctcgcgacggcaacatgcccaatcttatcctcgccggtcctcctggaacg
ggtaagaccagtagcattttggctcttgcccacgagcttctcggccctaactatagagag
gctgttctcgagttgaatgcttctgatgataggggtatcgatgttgttaggaacaagatt
aagatgtttgctcagaagaaagtcacacttcctccgggtcgtcataaggttgtcattctt
gatgaagctgacagcatgacatctggagcacagcaagctttgaggagaacgattgagatc
tactcaaactctacccggtttgcacttgcttgtaacacttctggcaagattattgagcct
atccagagtagatgcgcccttgttcgattctctaggttatctgatcaggagatacttggc
cgtctcatggtcgtggttcaagctgagaatgttccttatgtacctgaaggccttgaggcg
ataatcttcacagctgatggtgatatgaggcaagctctgaacaacttgcaagctacattc
agtgggtttcgctttgtcaatcaagaaaacgtcttcaaggtctgtgaccagcctcacccg
cttcatgtcaagaacatggttcgcaatgtgttggaaagcaagtttgacgatgcttgtcac
ggcatgaagcagctatacgatctaggctactctcctaccgacattatcacaacacttttc
cgtataataaagaattatgatatggctgagtatctgaaacttgagttcatgaaagaaact
ggttttgcgcatatgagaatatgtgatggagttggatcatacctccagctatgtggtctt
cttgctaagttagccgttgttcgtgaaacagcgaaagctgcttag
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