KEGG   Brassica napus (rape): 106410777
Entry
106410777         CDS       T04128                                 
Name
(RefSeq) pre-mRNA-processing protein 40B
  KO
K12821  pre-mRNA-processing factor 40
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106410777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106410777
Spliceosome [BR:bna03041]
 Complex A
  U1 snRNP components
   U1 related factors
    106410777
 Complex B
    106410777
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th WW_2 Inhibitor_I66
Other DBs
NCBI-GeneID: 106410777
NCBI-ProteinID: XP_048635380
LinkDB
Position
A5:21200307..21208781
AA seq 995 aa
MANNPHYPGIQPFQHPNASSIDLPRGFAPSMNFQHRPPIQAPPQSEQVAHLASQNFQYVG
RGGTTMNNGFPPQSYTPQLLQSMHHSVERPSQSNQGQHVPLGHPSLISQPNVPVASGTFL
PEPYLRTSDINMNGGPRALFSYQGATSFEHLRAPTQVTGPSSHSQAQQSAPISQANAPSS
IMNPAFEHPKVASSQPIPSQEAATDWVEHTSADGRRYFFNKKTKQSTWEKPVELMTLFER
ADAKTDWKEHSSPDGRKYYYNKVTKQSTWTMPEEMKIAREQAENASVQGLHAEGVVDASR
VLSRSDTASTAAPTGLPNQTSSTPPTSDTSEKLALTSDREQAASVPGSSSPVENVDQVQA
IADKTQELCDTAKTDNPSVTVMITSAATLVDKETVSTENSGDADDVSAKNTNQGSGTGPK
ESQKHVVDSERVDSQSEGKQIHQENISYTNKSEAVDVFKSLLKSANVGSDWTWEQAMREI
INDRRYGVLRTLGERKQAFNEFLAQMRKAAEEEKIARQLKRYEDFRRMLEESVELTPSTR
WSKAVTMLEDDERFKVVEREKDRRNIFEDHISDLKEKERVKAFEDRKRNIVEYRRFLESC
NFIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEERKKIQKEELKKAE
RKHRDEFRGLIDEHIATGELTAKSSWRDYLVKVKDLPVYLAIASNSSGATPKELFEDAAE
DLKRKYHELKSRIKDVLKLRKVTLSTESTFDEFKVSVSEGISSPSIPDFKLKLVFDDLLE
RAKEKEEKEARKQTRNTEKLVDMLRSFKYITASSSWEDSKHLVEGTEKFRTIGDESFRKK
TFEDYISHLKEQAKRIKQNKKEHVREEHDREKDKYGREKERVRERDNRDHRKQGSADNYN
HDVDELHGKERRRSGRDSHSRHRERHTSVKENEADHYKESHKAGRGHKESRQQRGLVREA
EDEGREKRRRKEGDSEQTKRAEKEEELEDGECGRY
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggctaataacccccactatcctggcattcagccattccagcatccgaatgccagttcc
atagatttaccccgaggctttgctccatccatgaattttcagcatcgtcctcccattcaa
gctcctccgcagtccgagcaagttgctcatttggcttctcaaaattttcaatatgttggg
cgaggcggcacaacgatgaacaatggatttccacctcagtcttatacgcctcagttacta
caatcaatgcaccattcggttgaaagacctagccaatcaaatcaggggcaacatgtgcca
ctaggacatccgtctctaatttcacagccaaatgtgccagttgcctctggtaccttcttg
ccggagccttacctacgaacttcagatattaatatgaatggtggccctagggcactcttt
tcttatcagggtgccacatctttcgaacatctgagggcaccaactcaagtcactggacca
agcagtcatagtcaggcacaacaaagtgcacctatcagccaggctaatgcaccctcttct
ataatgaatccagcatttgaacatccaaaggtagcttcttctcaacctataccttctcaa
gaggctgcaacagattgggttgagcatacctcggcggatggacggagatattttttcaac
aagaagacgaagcagtccacttgggagaagcctgttgagttgatgactctatttgagaga
gcagatgcaaaaactgactggaaagaacattcaagtcctgatggaagaaagtattattat
aataaggttaccaagcaatcaacatggacaatgcctgaggagatgaagattgctcgtgaa
caagcagaaaatgcatctgttcaagggctgcatgcagaaggcgttgttgatgcttctagg
gtgctgtctcgttctgatacagcatcgactgcagctccaactggtttaccaaaccaaaca
tcatctacgcctccaacatctgataccagtgagaaactagctcttacttctgatcgggag
caggcagcttcagttcctggaagctcttccccggtcgaaaatgttgatcaagttcaggca
attgcagataaaacacaagaattgtgtgatactgcaaaaactgataatccttctgtcact
gtgatgataacttctgctgctacattggttgacaaggaaacagtatcaaccgagaacagt
ggagatgcagatgacgtgtcagctaaaaacacaaatcaaggtagtgggactggaccaaaa
gaaagccaaaaacatgtggtggatagtgaaagagttgacagtcagtcggaaggcaaacag
attcatcaagagaatatttcttatacgaacaaatcggaagctgtggatgtcttcaaatca
cttttgaaatctgccaatgttggatctgactggacatgggagcaggccatgagagaaata
attaatgatagaagatacggggttctgaggactcttggagagcggaagcaagccttcaat
gagtttctagctcaaatgagaaaagcagcagaggaggaaaagatagccagacagctaaaa
cgatatgaagattttagaaggatgttagaggaaagcgtggagcttactccttctactcgg
tggagcaaggctgtgactatgttggaagacgatgagcgtttcaaagttgttgaacgagaa
aaagaccgtcgtaatatttttgaagatcatatcagtgacttaaaggagaaggagcgggtg
aaagcttttgaggatcgcaagcggaacattgttgaatacaggagatttttggaatcttgc
aatttcattaagcctaatagccaatggcgcaaagttcaggaccgtttagaagtggatgaa
agatgttcacgtcttgagaaaattgatcagctagaaatatttcaggagtatctgcgcgat
ctggagagagaagaagaggagagaaagaagatacaaaaggaagaactaaaaaaagcagag
cgaaagcatcgtgatgagttccgtggtctgatagatgaacatattgctacaggagagctt
actgccaaaagtagttggcgtgattatttagtgaaggtaaaagatttaccagtatattta
gcaattgcatcgaactcctctggcgctacaccaaaagagttatttgaagatgctgctgag
gatttgaaaagaaagtaccacgagctcaaatctcggataaaggacgtattgaagctgaga
aaggtaacgttatccactgaatcaacgtttgatgagttcaaagtctcagtttctgagggt
atcagttccccatctattcctgactttaaactgaagttagtgtttgatgatttgctggaa
agagcaaaggagaaggaagagaaggaagccagaaaacagactcggaatactgaaaaattg
gtggatatgcttcgctccttcaagtatataactgcctcttcatcctgggaggattctaag
catcttgttgaaggtactgaaaaattccgtaccataggggacgagagcttccggaagaag
acgttcgaggattacatatcgcacctgaaagaacaggcaaaaaggatcaaacagaacaag
aaggaacatgttagagaggaacatgacagggagaaggataaatacggaagagagaaggag
agagtgagagaaagagacaatagagatcatcgtaagcaaggttcagctgataattacaac
catgacgtggacgaactccatggaaaagaacgtagaagatccggaagagatagccatagt
agacatcgagaaagacatactagtgtgaaggaaaatgaggcagatcattacaaagaatct
cataaagctggtcgtggccataaggaatcaagacaacagcgaggtttggttcgggaagcc
gaggatgaaggcagggaaaagcggcgtagaaaagaaggagatagtgagcaaacaaagcgt
gcggaaaaggaagaagaacttgaagatggagaatgtggtaggtactaa

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