KEGG   Brassica napus (rape): 106410933
Entry
106410933         CDS       T04128                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106410933
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106410933
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106410933
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106410933
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106410933
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel Serglycin
Other DBs
NCBI-GeneID: 106410933
NCBI-ProteinID: XP_013707021
UniProt: A0A078F899
LinkDB
Position
C5:complement(22484005..22489866)
AA seq 832 aa
MEHLSVAQSQSEINEDMSLKNHPPDKDTDKDTSMEQPTSPRHRKVLARWLPDEAQRPIVD
EAPVFSPSLEEFEDTLAYIEKIRPLAEPYGICRIIPPPTWTPPCRLKEKTIWEHTKFPTR
IQNVDLLQNREPMKKKPKSRKRKRRRNSRMGSSRRRSASASASASGSGSGSSPSEPASSP
EAEEKFGFNSGSDFTLEEFEKYAQHFREAYFEKKDSVGETKWTPSVEDIEGEYWRIVEQP
TDEVEVYYGADLENVVLGSGFYKKGDRDMDQYVVSGWNLNNLPRLPGSVLSFEDCDISGV
LVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKYLPDLF
EEQPDLLHGLVTQFSPSILKDEGVQVYRVVQNAGEYVLTFPRAYHAGFNCGFNCAEAVNV
APVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASSVGNESTTNLRW
KSFCGKNGTLTNAVQARLRMEEERLADIDRESSSLVKMEKDFDSNCERECFSCFYDLHLS
ASGCKCSPDEYACLKHSDDLCSCEEKDRFVLLRYTMDELSSLVRALEGESDDLKIWASKV
LGVQHSDEYQNKTISVIKEEEDKKLKEGSFDLNIDLELDCLENPKEEEVSTSGEINTSEN
FSASVEPINLGFLIFGKLWCNKHAIFPKGFTSRVKFYNVLDPTRMSYYISEVLDAGLMGP
LFRVTLEESPDESFFNVSAQQCWEMVLQRVKHTSTNLGLTTLPRLESINGLQMFGLLSQS
TVQAIEALDPNHRLIEYWNHKNQTQSESKDHFISSNCSVSLTKGKLFGVDLM
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggaacatctcagtgttgctcaatcacaatctgagatcaacgaggatatgtctctgaag
aatcatccaccagacaaggatacggacaaagacactagcatggaacaacctactagtcca
cgtcatcgaaaggttcttgctagatggttaccagatgaagcgcagagaccaatcgttgat
gaagctcctgttttctctccatcattagaggagtttgaagatacacttgcatatatagaa
aagatacgtccactagcggagccatatggtatctgtcgaatcatcccaccacccacatgg
acgcctccttgccggcttaaggagaagactatatgggagcataccaagtttcccactcgg
atccagaacgtggacctgcttcagaaccgggaacccatgaagaagaaaccaaagagcagg
aaacgtaaacggagaagaaactctaggatgggttcctctaggagacgatctgcttctgct
tctgcttctgcttctggctctggttctggttcttctccctctgaacctgcttcctctcct
gaggccgaggagaagttcggctttaactcgggttcagactttactctggaagagtttgag
aaatacgctcagcattttagagaggcttactttgagaagaaagactctgttggtgaaaca
aaatggacaccgtctgtggaggatatcgaaggcgagtactggcggatagttgaacaacca
acagatgaagttgaggtatattatggagctgacttggagaacgtggtacttggaagcggg
ttttacaagaaaggggatagagatatggatcagtacgtagtctctggctggaacttgaat
aacttaccgcgtctccctggctctgttctctcttttgaggattgcgatatctctggtgtt
ctagtcccatggctctatgtaggaatgtgtttttcttcattttgttggcatgtggaggac
catcatctgtattcactaaattatcatcactttggggagccaaaagtatggtatggtgtt
ccaggaagcaatgcaaccgcactcgagaaggcgatgagaaaatatctacctgatctgttt
gaagaacagcctgatctacttcatggcctggttactcaattttcaccttcaattctaaaa
gatgagggagtccaggtttatcgtgtggttcagaatgcaggggagtatgtacttacattc
ccgagggcgtatcatgctggattcaactgcggtttcaactgtgcagaagcggttaatgtt
gctccggttgattggttggctcatggacagaacgctgtggagctatacagtaaagagacg
aggaagacctctctctctcatgacaaacttctcctcggagcagcttatgaagctgtaaag
gctctttgggaactctcagcttcttctgttggaaatgaaagcacgacaaacttgagatgg
aagagtttctgtgggaagaacggaacacttaccaacgcggtccaggctcggttacgtatg
gaagaggaaagacttgcagatattgatagggaatcttcgagcttggtgaagatggagaag
gactttgattcaaactgtgaaagggaatgcttctcatgcttttatgatttgcatctctct
gcttctggctgcaagtgctcgcctgatgaatacgcgtgtcttaaacactcggacgatctg
tgttcatgtgaagagaaggatagatttgtcctcctccgttacaccatggatgagttaagc
tcgttggtgagagcattggaaggggaatcagatgatttaaagatatgggcttccaaggtg
ttaggtgttcaacacagtgatgaatatcaaaataagacaatttcagttatcaaggaggag
gaggacaagaagctaaaggaaggttcgtttgatctgaacatcgacttggagttggattgt
ctggaaaaccctaaagaagaagaagtcagcaccagtggcgagataaacacttcagagaac
tttagtgcatcggtggagcctataaacctcggtttcttgatttttggaaagctttggtgc
aataagcatgctattttcccaaaaggattcacaagtcgtgtcaagttctacaacgtgctt
gatccaacaagaatgagctattacatctctgaggttttggatgcaggactcatgggccca
ttgttcagggttactctggaagaatctccagacgagagcttcttcaatgtctcggcccaa
caatgctgggagatggtgttgcagcgagttaaacacacatccacaaatcttggtcttact
actttaccgcggcttgaaagtattaacgggcttcaaatgtttggtctcctctcgcagtct
acagttcaggccattgaagctcttgacccaaaccatagactcatcgagtactggaaccac
aagaaccaaactcaatctgaatcaaaagatcacttcatatcatcaaactgctccgtgagt
cttaccaaaggaaaacttttcggagtggatttgatgtaa

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