KEGG T04128: 106410972

Brassica napus (rape): 106410972

Entry

106410972         CDS       T04128

Name

(RefSeq) E3 ubiquitin-protein ligase ATL42-like

K10664

E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]

Organism

bna Brassica napus (rape)

Brite

KEGG Orthology (KO) [BR:bna00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106410972
Enzymes [BR:bna01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106410972
Ubiquitin system [BR:bna04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    106410972

SSDB

Motif

Pfam:

zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-HC5HC2H Prok-RING_4 zf-Nse zf-RING_4 RINGv

Other DBs

NCBI-GeneID:

106410972

NCBI-ProteinID:

XP_013707069

LinkDB

Position

C7:complement(51196053..51198478)

AA seq 422 aa
MYQNIFFFFLTTLHSYYYVSAQRPAPPLTNGDLVANFEPSLAVVTVVLAIMFSLTFFLLV
YAKCCHIDLRSRTGDGRRQDRRSIQGIFVNRSTNSSDRFSGLDRTVIESLPLFRFSALKG
SKQGLDCSVCLSKFESVEILRLLPKCRHAFHVGCIDQWLEEHATCPLCRDRVSIEEEYSI
YGNSFRFLNQSEVRDDSSLELYIEREEQEEEEVGGSSRFSVGDSFRKILKLGHKEKPLLD
QHGNDKDERKLMHKFNHRIIVSDVVFKNRWSNVSTSDLMFLNSEMVSSISSQRFLSMDRV
KRGDEEGGRGILGVKEEMEEKRMLENKLSTMKTMLLSENGESGSKARSVMVEPGRRSVSE
ITTVPRLSVAVHGDYSGLTAVTALETERRRRLWLPIARNTAQWFANRELRKQINITHLHL
DV

NT seq 1269 nt +upstreamnt +downstreamnt
atgtatcaaaacatcttcttcttctttctgacaaccttgcacagctattactatgtctct
gctcagcgtcctgctcctccgctcacaaacggcgacctcgtcgccaatttcgagccgagt
ttggccgtcgtcaccgtagttctcgccatcatgttctcgctcactttcttcctcctcgtc
tacgctaagtgctgccacatcgatctccggtcaagaaccggcgacggaagacggcaagat
cgccggagcatacaaggaatattcgttaaccggtcaactaactcgtcggaccggttctcc
ggtttagacagaacagtaatcgagtcacttcctctgttcaggttctctgctttgaaagga
tcaaaacaagggcttgactgttctgtttgcttgtctaagttcgaaagtgtcgagattctt
agattgctgccaaaatgtcgtcacgctttccacgtcggatgcatcgatcagtggcttgag
gagcacgctacgtgccctctatgcagagacagagtctcgatagaagaagagtactctatt
tacggaaacagttttcggttcttgaatcagtctgaggtgagagatgattcgagcttggag
ctttacatcgaaagagaagaacaagaagaagaagaagttggtgggtcatcgagattcagc
gtcggagatagttttcggaagattcttaaattaggtcataaagagaaacccttacttgat
caacacggaaacgataaagacgagaggaagctgatgcataagttcaatcataggatcatt
gtgtctgatgttgtgttcaagaatcgttggagcaatgtgagtacgtcggatttgatgttt
ttgaactcggaaatggttagttcgatttcaagccagaggttcttatcgatggatcgagtt
aagagaggtgatgaagagggtggaagaggtatcttgggagtcaaggaagagatggaagag
aagagaatgttggagaacaagttgagtacgatgaaaactatgttgttgtcggaaaatgga
gagtctggttcgaaagcaagaagcgttatggtcgagccaggaagaagatcggtctctgag
atcactacagttcctagactcagtgttgcggttcatggagattatagcggtttaaccgca
gtgactgcgttagaaacggagagaagacggcgtttgtggctgccgatcgctagaaacaca
gcacaatggtttgctaatagagaattaagaaagcaaattaacataacacacctacactta
gatgtttag

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