Brassica napus (rape): 106411026
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Entry
106411026 CDS
T04128
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00094
Ceramide biosynthesis
bna_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106411026
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106411026
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106411026
Amino acid related enzymes [BR:
bna01007
]
Aminotransferase (transaminase)
Class II
106411026
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
106411026
NCBI-ProteinID:
XP_013707154
UniProt:
A0A816NIA9
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Position
C7:complement(53879401..53882172)
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AA seq
480 aa
AA seq
DB search
MDTNLVEMFRAGLNWVTMALDAPSARVVLFGVRIQWHIFVEVLLGFVIVILLSQKSYKPP
KRPLTEQEIDELCDEWVPEPLIPPITEDMRHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLSTPDTILYSYGLS
TMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMDSLRSTLEKIMTKNK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYKFRVILDESNSFGVLGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPELLVKMKQHIALLWKGLKDIKGMSLASDPESPIVFLKLENSSGSTKEDLLLLE
KMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatctggtggaaatgttcagggccggtttgaactgggtgacaatggctctg
gatgctccttcggctagagttgtcttgttcggtgtccgaatccaatggcacatctttgtg
gaagttttgttgggttttgtcattgtcatcctcctctctcaaaagagttacaaacctccc
aagagaccgttaactgagcaggaaatagatgagctgtgtgatgaatgggttcctgagcct
cttatacctccaattacagaagacatgaggcatgagccaccagttcttgaaagtgctgct
ggcccgcatacaacggttaatggaaaagacgtggtgaattttgcgtctgctaattatctt
ggactcattggacacgagaagttgctggaatcatgcacttctgcgttggagaaatatggc
gttggttcttgtggtcctcgtggtttctatggtactattgatgttcatcttgattgcgaa
accagaatatcaaagtttttgagtactcctgatacaatcctttattcatatggactttcc
acgatgttcagcaccattccttgtttctgtaaaaaaggcgatatcattgttgccgacgag
ggtgttcactgggggatacaaaatgggctccagctttcaagaagtacaatcgtgtacttc
aagcacaatgacatggactctctccgtagtaccctcgagaagatcatgacaaagaacaag
cgctctaagaacttgaggcgttacattgtagctgaagctgtatatcagaactctggccaa
atcgcacctctagatgagatagtgaaactgaaagagaagtataaatttcgtgttatattg
gatgaaagcaactctttcggcgtgcttggccgttccgggagaggtcttgcagagcatcac
ggtgtccctattgagaagatagatgttgtgactgctgcaatgggccacgcactagccaca
gagggtggattctgcaccgggaacgcccgcatcatcgattaccagagactcagcagttca
ggatatgtgttctctgcctctttgccaccgtaccttgcgagcgctgctatcacagccatc
gacgtcattgatcaaaaccctgagttgttagtcaagatgaagcagcacattgctctgtta
tggaaaggtttgaaagacatcaaggggatgtcgctagcaagcgaccctgagtcgcctatt
gtcttcttgaagttagagaattcgagtggttcaactaaagaggacttgcttctactcgag
aaaatggctgatcgtgctctgaaggaagactcattgttggttgtgagctctaagaagtcg
tttcttgataagtgccggttacctgtgggtatcaaactcttggtctcagcgggacattca
gagtctgatcttgttaaagtatctgagtctctgaagagactcgcttcagagcttctactc
taa
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