Brassica napus (rape): 106411049 Help Entry 106411049         CDS       T04128                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism bna  Brassica napus (rape) Pathway bna04142   Lysosome biogenesis bna04148   Efferocytosis Brite KEGG Orthology (KO) [BR:bna00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     106411049    04148 Efferocytosis     106411049  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bna04131]     106411049 Membrane trafficking [BR:bna04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     106411049 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 zf-HC5HC2H_2 GET4 Motif Other DBs NCBI-GeneID:  106411049 NCBI-ProteinID:  XP_013707178 UniProt:  A0A816NH42 LinkDB All DBs Position C7:complement(53916493..53920987) Genome browser AA seq 997 aa AA seqDB search MVHNAYDSFQLLTNCPARIDAVESHNSKLFAGCYDGSLRIYSPQSPSSSSSDELRQDSYL LETTVTGFAKKPIVAMKVLASRELLLSLSESIAFHKLPNLETVAVITKAKGANAYSWDDR RGFLCFSRQKRVCVFKHDGGGGFVEVRDYGVPDTVKSISWCGENICLGIRKEYVILNTAN GTLSEVFPSGRVAPPLVTFLPSGELLLGKDNIGVFVDQNGKLLQTERLCWSEAPTAIVIQ NPYAIALLPRRVEVRLLRSPYPLIQTIVLQNIRHLVKSNNAVMVGLDNSVHALFPVSIGA QIVQLTASGNFEEALALCKLLPSEESSLRAAKESSIHTRFAHYLFENGSYEEAMEHFLAS QVDITHVLSMYPSITLPKTTMIPPPDKMLDISGEEASLSRGSSGFSDDMESSFLESEGNA ALESKKMSHNTLMALIKYLQKKRPSIIEKATSEGTEEVISDAVGKTYGAYDSSKTKKSNK GRGTISLNSGAREMAAILDTALLQALLHTGQSGASVELLKGVNYCDVKICEEILMKSKSY SALLELFKSNSMHHEALKLLNQLSEESKSNQSQTDVKQIFSPELIIEYLKPLCRTDPMLV LEYSMLVLESCPTQTIDLFLSGNISADLVNSYLKQHAPNMQGRYLELMMAMNETAVSGNL QNEMVQIYLSEVLDLHAALSAQQKWDDKDHPPERKKLLSALENISGYNPQTLLKRLPRDA LYEERAVILGKMNQHELALSIYVHKLHAPDLALAYCDRIYESVSFLPSGKPSSNIYLTLL QIYLNPKKSAKDFAKRIVALGSFESSDTTKMMESVLSSKVKGGRSKKIVAIEGAEDMLRA GLSSSTDSGRSDVDAEEPMEEGNSTVMISEVLDLLSQRWERINGAQALKLLPRETKLQNL LPFLAPLLRNSSEAHRNYSVIKSLRQSENLQVKEELYKHRKGVVQVTSDSMCSLCNKKIG ASVFAVYPNGKTLVHFVCFKDSQGMKAVSKTSQGRRR NT seq 2994 nt NT seq  +upstreamnt  +downstreamnt atggttcacaatgcttacgattcctttcagctcctcaccaactgccccgcccggatcgac gccgtcgaatcccacaactccaagctcttcgccggatgctacgacggctccctccgcatc tactccccccaatccccctcctcctcctcctcggatgagctccgccaagactcgtacctc ctcgaaacgaccgtcaccggattcgccaagaaacccatcgtggcgatgaaggtcttggcc tccagagagctgctcctctctctctcggagtcgatcgcgttccacaagcttcccaatctg gagaccgtcgccgtgatcaccaaagcgaaaggcgccaatgcttactcgtgggacgatcga cgtggcttcctgtgcttctctaggcagaagagggtctgcgtcttcaagcacgacggagga ggagggtttgtggaggtgagggactatggagttcctgatactgtaaagtccatttcttgg tgcggtgagaatatttgcttggggattaggaaagagtatgtgattctcaacactgctaat gggactctctctgaggtgtttccttctgggagagttgctcctcctctcgtcacttttcta ccttctggtgaacttctccttgggaaggataacattggagtttttgttgatcaaaatggg aagctgctccagacagagaggctttgctggtcagaggccccaacagctattgtcattcag aatccctatgcaatagccttgttacctcgacgagttgaggttcggttgctacgaagcccc tatcctttgatacagacaattgttctccagaatattcgtcaccttgtcaagagcaacaat gctgtgatggttggtttggataactctgttcatgctctcttccctgtttctatcggtgct cagattgtgcaactaacagcttctgggaactttgaggaagccttagctctatgcaagtta ctcccctctgaagagtcaagcctaagagctgcgaaagagagttcgattcacacaagattt gctcattatcttttcgaaaacgggagctatgaggaagccatggaacactttctggcatct caagtagacatcacgcatgtactctccatgtatccatccatcactcttcctaaaacaaca atgattcctccaccggataagatgttagacatttctggagaggaagcatctctgtcaaga ggctcatctggcttttctgatgatatggagtcttcatttttggaatctgaaggcaatgca gcccttgaatctaagaaaatgagccacaacactctgatggctcttataaagtacttgcag aagaagagaccaagtattatcgagaaggccacttctgaaggaacagaagaggtcatctct gatgccgttggcaaaacttacggagcgtatgattcttccaagactaagaagtccaacaag ggacgtggtacgatctcgcttaactcaggtgcaagggagatggcagcgattcttgacaca gctcttctccaagcacttctacacactggacagtctggagcttctgtagagttattaaag ggtgtcaactactgcgacgtaaagatttgtgaggagatactaatgaaaagcaaaagttat tctgcactgttagaactgttcaagagcaattcgatgcaccatgaagcccttaagcttctt aatcagctctcggaagagtccaaatcaaaccagtcacaaactgatgtaaaacagatcttt agtcctgagttgatcattgaatatctcaagcctctatgcaggactgatcctatgcttgtg ttggagtactctatgctagtcctggagagctgtccaacacaaaccatcgacttgtttctg tctggaaacatctcggccgaccttgtcaattcatatctgaagcagcatgctccaaatatg cagggtagatatttggaactcatgatggcgatgaatgaaaccgcagtttctgggaatctc caaaacgagatggtacaaatctacctttcggaagtgcttgacttgcatgctgcattaagc gcgcagcagaaatgggatgacaaggatcatcctcccgaaaggaaaaaactattgtctgca ttagagaacatctccggatataatccacagactttgttgaagcgtcttccacgtgatgct ctctatgaagagcgtgcagttattttgggtaaaatgaatcaacacgagctcgctttgtcc atctatgttcataagcttcatgcacctgatctggcgctggcttactgtgatcgtatatat gagtccgtatcttttctaccatctggaaaaccgtcaagcaacatctacctcacacttctc caaatctacctgaatcctaagaaaagcgcaaaggactttgcaaaacgtattgtagctcta ggatcattcgagagttcagacaccacgaagatgatggagtctgttttgtcttcgaaagtc aaaggaggcaggtccaagaaaattgttgcgatagaaggtgctgaggatatgctgcgagct ggtctcagtagcagcactgatagcggaagaagcgacgttgatgctgaagagcccatggaa gaaggaaactccaccgttatgatttctgaagttcttgatctgttgagtcagaggtgggag aggatcaatggtgcacaggctctcaagcttttacctagagaaactaaactgcagaacctg cttccgtttcttgcaccccttcttagaaactcgagtgaagcacacaggaactattcggtc atcaagagtttgaggcagagtgaaaacttacaggtgaaagaggaactgtacaaacatagg aagggagtggtgcaagtaacaagtgatagcatgtgttcgctgtgcaacaagaagatcggg gcaagcgtctttgctgtttatcccaacgggaaaacgttagttcactttgtctgcttcaaa gattctcaaggaatgaaagctgtttctaagacatctcagggaagaagacgatga

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