Brassica napus (rape): 106411111
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Entry
106411111 CDS
T04128
Name
(RefSeq) transcription elongation factor TFIIS isoform X1
KO
K03145
transcription elongation factor S-II
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106411111
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106411111
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
YtxH
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
106411111
NCBI-ProteinID:
XP_013707251
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Position
C3:12808209..12810001
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AA seq
379 aa
AA seq
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MESELIALFEAAKKAADAVAVDGVTSSSPEVSQSLDALEKLKTFPVTYNTLVATQVGKKL
RSLAKHPVEEIKSVATDLLETWKRVVIEETTSKAKKTESTNGCKEVKLERKDVNPVPVKV
QKLQRGDSAKSIKVERKEPDSKVKVERKEPDSKVKVERKEPDNKVKMDHRGQTTVKDEKV
SRETLTSVKPSDKAPNGAPKLTSMVKCNDPVRDKIRELLVDAMSKVHGESDEYDRARVVG
CDPIRVAVSVESHMFEKLGRSTGAQKVKYRSIMFNLRDSNNPDLRRRVLTGEVSPEKLIT
LSGEEMASDKRKQETNQIKEKFLFDCERGQAPKASTDQFKCGRCGQRKCTYYQMQTRSAD
EPMTTYVTCVNCDNHWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgagttgattgcattgttcgaggcggcgaagaaggcggcagatgcggtggct
gtcgacggtgttacctcctcaagcccggaggtttctcaatctctcgatgcattagagaaa
ctcaagacgtttcctgtcacgtacaacacgctcgtcgcgactcaggtagggaagaagctg
aggtctcttgcaaagcatcctgttgaggaaatcaaaagcgtagctactgatctgcttgag
acatggaagagagttgtcattgaggagacgacatccaaggctaagaagaccgaaagcaca
aacggttgcaaagaggttaagttggagaggaaggatgtgaaccccgtgcctgtgaaagtc
cagaagctccagaggggtgattcagctaagagtatcaaggttgagagaaaggaaccagac
agcaaagtgaaggtagagagaaaggaaccagacagcaaagtgaaggtagagagaaaggaa
ccagacaacaaagttaagatggatcatcgtggtcagactactgtcaaggatgaaaaggtc
tcaagagaaacgctaacaagtgtgaagccttcagacaaggcacctaatggtgctccaaag
ctgacttcaatggtcaaatgcaacgatcccgtgcgtgacaagatccgtgagctgcttgtg
gacgccatgtccaaggttcatggagaatctgatgagtacgacagagcgagagtagttgga
tgtgatccaatccgcgttgctgtctctgtggagtctcatatgtttgagaaactgggccgg
tcaacgggagcgcagaaggtcaagtacagatctataatgttcaacctgagggacagtaac
aacccagacctgagaaggagagttctcactggggaggtgtcaccagagaaactcatcaca
ctgtcgggtgaagagatggcgagcgacaagaggaaacaagagaccaaccagatcaaagag
aagtttctgttcgattgtgaacgtggtcaggcaccaaaagcaagtactgaccagttcaag
tgcgggcggtgtggtcagcgcaaatgtacttactatcagatgcagacaaggagtgctgat
gagcccatgacgacttatgttacatgtgttaactgtgacaaccactggaagttctgttga
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