Brassica napus (rape): 106411217
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Entry
106411217 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106411217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106411217
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106411217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
106411217
NCBI-ProteinID:
XP_013707380
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Position
C7:complement(35339431..35341900)
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AA seq
425 aa
AA seq
DB search
MDMESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVA
ERVVLLRHVIDGKLVEAKKAVPRDDHKSNSSLQGSSPGPANSKKIFVGGLASSVTEAEFK
KYFAQFGVITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVP
KDPVRNQMNVNGFGSNRISALLMNEYTQGFTPSPISSYGVKPEVRYSPGVVNRGGFSPFG
HGYGIDLNFEQDQTQRYGSGSSAGFGRPFSPGYTPSLSRYGSQIETGGGANGSVLNASTK
NHLWGNGGGLGYMSNSPVSRSSFNGNSGMSSLGSIGDNWGGAGARARNSYRSEGGGLGLE
AMRGVHVGGFSNGLNSLEADSLYSDSAWLSMPAKADEKLGMGAFDFMSRGPAGYINRQPN
GGIAA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagtcaggtaagctcttcatcggcgggatctcttgggagaccaccgaagac
cgtcttcgcgactattttcagagcttcggcgaggttttggaagccgtcatcatgaaggat
cgttccactggtcgtgctcgtggctttggtttccttgtcttcgctgatcccaatgttgcc
gagagagtcgtgctgctcagacacgtcattgatggtaaacttgttgaggcgaagaaggca
gttccaagagatgatcacaaaagtaacagcagtctacagggatcatcacctggtccagct
aacagtaaaaagatctttgttggaggtttggcttcatcggttacagaggctgagttcaag
aagtactttgctcagtttggggtgattactgatgttgtggtgatgtatgaccaacgaaca
cagcgaccgagaggctttgggttcatctcttatgaatcagaggacgctgtagacagagtc
ttgcgaaggacgttccacgaactcaatgggaagatggtggaagtcaaactggctgttccc
aaggacccagtccggaaccagatgaatgtaaatggctttggcagtaatagaatcagtgcg
ttgctgatgaacgagtacacacaagggttcaccccgagtccaatctcaagttatggagtg
aaacctgaggttaggtacagtccaggagtagttaataggggcggattctcaccttttgga
catggatatgggattgatctgaatttcgagcaagaccagactcagaggtatggatctggt
tccagtgcaggctttggacggccctttagccctggatatactccgagccttagcaggtac
ggtagccagattgagacaggaggaggagctaacggttctgtgctaaatgcatcaacaaag
aaccatttatggggaaatggtggtggtctaggttacatgtcaaactcacccgtctctaga
agcagcttcaatggaaactctggaatgtcttcactaggcagcattggagacaactgggga
ggagcaggtgcacgtgcacgtaatagctatcgcagtgagggaggaggcttaggattagaa
gcaatgagaggagttcatgttggtggtttcagcaacggtttgaacagcttggaggcagac
tctctctacagtgactcggcgtggctttcgatgcctgcaaaggcggatgaaaaattggga
atgggagcatttgacttcatgtctagaggaccggctggatacatcaacaggcaaccaaac
ggaggaattgcagcttag
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