Brassica napus (rape): 106411366
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Entry
106411366 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106411366
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106411366
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106411366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
Rcat_RNF216
zf-RING_UBOX
UBA_ARIH2_N
Motif
Other DBs
NCBI-GeneID:
106411366
NCBI-ProteinID:
XP_013707569
UniProt:
A0A078J540
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All DBs
Position
C2:complement(14632127..14637122)
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AA seq
564 aa
AA seq
DB search
MDGDEDFYSGNECADNDSDYADSVDADYEFVEDDVDDSDDLVFRRRQQNYSVLSEEDICK
LQEEDISRVSSVLSISTISSAILLRHYNWCVSRVHDEWFADEEKVRHAVGLLDKPLVHFP
SDAEAELTCGICFETYLSDKLHAAACGHPFCDSCWEGYISTAINDGPGCLMLRCPDPSCN
AAIGQDMINALAPEKDRQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFVVGSGNYDVNC
RCCYSFCWNCAEEAHRPVVCDTVSKWIMKNSAESENMNWILANSKPCPKCKRPIEKNQGC
MHITCTPPCKYEFCWLCLGAWTEHGEKTGGFYACNRYDAAKQDGIYDETEKRREMAKNSL
ERYTHYYERWATNQSSRQKALADLKKMQTDDIEKLSDIQCQPESQLKFIIEAWLQIVECR
RVLKWTYAYGFYIPDHEHGKREFFEYLQGEAESGLERLHQCAEKELKLYFEAKGPSEDFN
EFRTKLAGLTSVTKNYFENLVRALENGLPDVNSHGAYGRAASSKNKGSTSRASSSDSGGQ
WACERCTLVNPKSVTICQICEHGR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatgaagatttctacagcggcaacgaatgcgccgacaacgactccgattac
gccgatagcgtggatgccgattacgagttcgtggaagatgacgttgatgattctgatgac
ctcgtcttccgccgccgccagcaaaactatagtgtgttaagcgaggaggatatatgtaag
cttcaagaagaagacatctcgagggtttcttctgttttgtccatttcaactatctcttct
gctatcctccttcgtcactacaactggtgtgttagcagagttcatgatgaatggtttgct
gacgaagaaaaagtccgacatgcggttggcttgttggacaaacctcttgttcatttccca
tctgatgctgaagccgaacttacctgtggtatttgttttgagacttacctttctgataaa
ttgcacgctgctgcttgtggtcaccctttttgcgattcgtgctgggaaggttatatctcc
acggcgattaatgatggtccagggtgtcttatgttacgatgcccggatccttcttgcaat
gctgctattggtcaggatatgatcaatgcgttagctcctgagaaagatagacagaagtac
acaagttattttgttagatcatacgttgaagacaatagaaagaccaagtggtgtcctgct
ccaggctgtgactacgctgtaaactttgttgttgggagtggtaattatgatgtgaattgt
cgatgttgttacagtttctgctggaattgtgctgaagaagctcaccgtcctgtagtttgt
gacaccgtatctaagtggatcatgaagaatagcgctgaatctgagaacatgaattggatt
ttggcaaattcgaagccctgtccaaaatgtaaacggccaatagagaagaaccagggttgt
atgcatattacatgtaccccgccatgtaaatatgagttctgctggctctgtctgggagca
tggacagagcatggtgaaaagacaggtggcttttatgcttgtaaccgttatgatgcagca
aagcaagacggcatttatgatgagactgagaaacgccgagagatggcaaaaaattctctt
gagagatatacccactactatgaaagatgggcaaccaatcaatcgtctaggcaaaaggcg
ctggcggatcttaagaagatgcaaacagatgatatagagaagcttagtgacatacagtgt
cagcctgaatcacaactgaagttcattatagaagcgtggttacagatagtcgaatgcaga
cgagttcttaaatggacatatgcttatggtttttacatacctgaccatgagcatggaaag
agagagtttttcgagtacttacaaggcgaagctgagtcgggccttgaacgacttcatcag
tgtgctgaaaaagaactgaagttgtactttgaagccaaaggtccatcggaagattttaat
gagttccgcacaaaactcgctggtttaacaagtgtcaccaaaaactatttcgagaactta
gttagagcgctggagaatgggttaccggatgtgaactcgcatggtgcatatggtcgagcg
gcaagttcaaagaataagggatccacttcccgagccagcagctcggattcaggaggccaa
tgggcttgtgaacgttgcactcttgtaaatccaaagtcggtcaccatttgccaaatttgt
gaacatggccgttga
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