Brassica napus (rape): 106412199
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Entry
106412199 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106412199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106412199
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106412199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
106412199
NCBI-ProteinID:
XP_013708555
LinkDB
All DBs
Position
C5:complement(3614317..3617285)
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AA seq
245 aa
AA seq
DB search
MSSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAD
DAIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSGSRAPSRRSDYRVLVTGLPPSASW
QDLKDHMRKAGDVCFSEVFRDRGGMSGVVEYSNYDDMKYAIRKLDDSKFRNAFSRSYIRV
REYESRSVSRSPYYSRSRSRSYSYSSRSLSRSPTPRPRSPTPYSSISRSRSRSRSDSPVS
PVRSD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagccgatggaaccgcacgatctacgtcgggaacttgcctggcgatattcgc
atgcgagaggttgaagatctcttctacaagtatggacccattgtggacattgatctgaag
attccaccgagacctcctggttatgcattcgtcgagtttgaagatcctcgtgatgcagat
gatgctatttatgggcgggatgggtatgattttgatgggtgtcgactacgggttgagatt
gcacatggtggtcgtagaggttcatcctcggtggataggtacagcagtgggagccgtgca
ccttcgaggcggtccgactatcgtgtgctggtgacgggattaccgccatctgcttcctgg
caagaccttaaggatcacatgcgtaaagctggagatgtctgcttttctgaagtttttcgt
gaccgtggaggcatgtcaggggttgtggagtatagcaactatgatgatatgaaatacgcg
ataaggaagcttgatgactctaagtttcgaaatgccttctctagatcttatatacgggtg
agagaatatgagtcgaggagtgtgagtcgcagcccatactattctagaagcaggagtcga
agctatagttatagtagcagaagtttgtcgcgttctccaacgccccgtcctcgttctcca
actccgtatagctcgatctcaagatcccgatcaagatcgagatcagattctcctgtttca
cccgtgaggtctgattga
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integrated database retrieval system
