Brassica napus (rape): 106412269
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Entry
106412269 CDS
T04128
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106412269
03460 Fanconi anemia pathway
106412269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106412269
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106412269
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
106412269
NCBI-ProteinID:
XP_013708629
UniProt:
A0A816UXE4
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Position
C8:43529025..43532419
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AA seq
545 aa
AA seq
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MEDHILISDGEDPATPLPSLSKRARKDPISAILISDSDPTPFKQQPESSSTPLFVPDTPL
SDDFSLVKCSFASGALASNREDKFSGKRVISLDSEFEDSPGPETWKKHGPVLADIEEPRC
GLDSRSSVADSAEASTGIAQPSFGDNTNWMHEVSVRSSLTNDTIEVDSEQEKENISIENM
GRKKQIRSCKSRTLTGGEFPKKQLSREEKIRVMEEKKLRKEEEKLQKAIEAERKKLDKEK
QKWEKGKLALKSIVAEIDTKLVEGSIGGLLLSRFSEKGITFRVAPNPIERSIVWTLTIPE
DIALAFPEGPTISYVVLVYEAEEFCNLVANEKFLENITRVQDRYPSYTVCCLTNKLMSYV
KKREKEEYKNPGSWIRPPIDEVLAKLTTHYVRVHSRDCVDEAEVAEHVVGLTTSLASCQF
RKKLTMLSVNANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYAVAVWKKYPSMKSLL
KVYMDPNISIHEKEFLLKDLKVEGLVGGDIRLGEVCSKRIYRVLMSPSGTIKTDDVENGA
AFFTH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccatatccttatctccgacggggaagatccggccactccactcccatcactc
tcgaaacgggctcgaaaagatccgatctctgcgattctgatatccgattccgatccgacg
ccgtttaagcaacagccggaatcttcttccactcctttgttcgtccctgatacacctctc
tccgatgatttctctctcgtcaagtgttcctttgcctccggagccttagcttcaaaccga
gaagataaattctctgggaaacgagtgatatctctggattcagagtttgaggatagtcct
ggacctgaaacttggaagaagcacggacccgtgcttgctgatattgaggagccgcgttgt
gggttggattctagatcaagtgttgcagattctgctgaggcgagtactggaatagctcag
ccaagttttggtgataatactaattggatgcatgaagtcagtgttcgctcttcactgacc
aatgatactatcgaggttgattctgagcaagagaaagaaaatataagcatcgagaatatg
ggccgaaaaaagcagatcagaagttgtaagagtagaactcttacgggtggagaatttccc
aaaaagcagctgtcgagagaagaaaaaatccgtgtaatggaggaaaagaagttaagaaaa
gaggaagagaagttacagaaagcgattgaagctgagcgtaaaaagttagacaaggaaaaa
cagaaatgggaaaagggaaagttagctctgaaatctatcgttgctgagattgataccaaa
ctagttgaaggatccattggaggacttctactttcaaggttctctgagaaaggcattaca
ttccgtgtagcacctaatcctatcgagagatccattgtctggacgttgacaattccagag
gatattgctctggctttcccagaagggccaacgatcagttatgtcgtactagtgtatgag
gctgaagaattttgtaaccttgttgctaatgaaaaatttctagaaaacatcacaagagtt
caggaccgatacccatcttatacggtgtgctgtctcaccaataagttaatgtcttatgta
aagaaaagggaaaaggaagagtacaagaacccgggaagttggatacggcctcccatcgat
gaggtacttgcaaaattaactactcactatgtaagagtacattccagagactgtgtagac
gaggctgaggtcgctgaacatgtagttggtttaactactagtctggcttcttgtcagttc
aggaagaaactaactatgttatcagtaaacgctaatggtgcattagtctccaaggattca
gttgacaaacacttgattaaaaagagtccatggttaaaagcgttagtggcaataccgaag
gtgcagccaagatatgcggtagcagtgtggaagaaatatccatctatgaagtctcttctt
aaggtttatatggaccctaacatatcgattcatgagaaggagtttctacttaaagacttg
aaagtagaaggtttagtaggaggagatataaggttaggtgaggtttgttcaaagcggata
tatagagttcttatgtctccaagtggaaccattaagactgatgatgttgaaaacggtgct
gcttttttcacacattag
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