KEGG   Brassica napus (rape): 106412552
Entry
106412552         CDS       T04128                                 
Name
(RefSeq) WD repeat-containing protein LWD1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
bna  Brassica napus (rape)
Pathway
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    106412552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106412552
   03036 Chromosome and associated proteins [BR:bna03036]
    106412552
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106412552
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     106412552
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40
Other DBs
NCBI-GeneID: 106412552
NCBI-ProteinID: XP_013708913
UniProt: A0A078FT28 A0A816PNX0
LinkDB
Position
C8:46786843..46788104
AA seq 346 aa
MGTSSDPIQYGSDEQQKRSEIYTYEAPWQIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI
VQLDESNGEIRSDPNLAFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRV
ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIDREAVDTQLIAHDKE
VLDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICTAGDDSQALIWDISSM
GQQVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggaacgagcagcgacccgatccaatacggttccgatgagcagcagaaacgatcagag
atctacacatacgaagcaccatggcagatctacgccatgaactggagcgtccgccgcgac
aaaaagtaccgtctcgccatcaccagcctcctcgagcagtacccgaaccgagtcgagatc
gtgcagctcgacgagtccaacggcgagatccgctccgatcccaacctcgccttcgagcac
ccttaccctcccaccaagaccatcttcatccccgacaaggagtgccagcgccccgatctc
ctcgccacctccagcgacttcctccgtctctggcgaatcgccgacgatcactcccgcgtc
gagctcaagtcgtgcctcaacagcaacaagaacagcgagttctgtggaccgttaacctcc
ttcgactggaacgaagctgagccaagacggatcgggacttcgagcaccgatacgacgtgc
acgatctgggacattgatcgcgaggctgttgatacacagcttatcgctcacgataaggaa
gtgttagacattgcttggggtggagttggtgtgttcgcgtcggtctcggccgatggatct
gtgagagtgtttgatcttcgtgataaggagcattcgacgattatctacgagagctctgag
cctgatactccgttagtgcgtcttggttggaacaagcaggatcctaggtacatggcgact
atcatcatggacagtgctaaggttgttgtgcttgacattcgtttcccagcgcttcctgtg
gtggagcttcagaggcatcaggctagtgtcaatgcaattgcttgggctcctcatagctcg
tctcatatctgtactgcaggggatgattcgcaggctttgatttgggatatttcgtcgatg
gggcagcaggttgaaggtgggcttgatccgattcttgcttacaccgctggtgctgagatt
gagcagcttcagtggtcgtcttctcagcctgattgggttgctattgctttctcgacaaag
ctgcagattctcagggtttga

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