Brassica napus (rape): 106413987
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Entry
106413987 CDS
T04128
Name
(RefSeq) UPF0400 protein C337.03-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106413987
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106413987
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
Paramyx_P_V_C
CREPT
CTK3
Motif
Other DBs
NCBI-GeneID:
106413987
NCBI-ProteinID:
XP_022565948
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Position
C9:1908190..1910690
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AA seq
543 aa
AA seq
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MGLSPIMTPKPSRKITRWSFPSLFSSTAQLLRRFLGGVIRQNGAVIFLLQSLDLIPLRNN
NLLLLSTRKGADFEVVGTMGSSFNAQVLAEKLAKLNSSQASIETLSHWCIFHMNKAKHVV
ETWGRQFHCSPREQRLAYLYLANDILQNSRRRGSEFVGEFWNVLPDALRDVIENGDDSER
KSALRLVNIWEERKVFGSSGQILKEEILRKLPDNGGVVPLKKQANATPLERVVSAVEALH
GGQINVDDIVGKCTNVVGYLEKAAQEVESSGHTPGAAVVKEVQGQQTILRDCIEQLVAVE
TSRTSLISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCKQLIDHGSSSSQPPEEVI
KVSFTASAPVMFASNPPAQPVVVVDPRKTEAAAMVAKLTASTSSAEMLSYVLSSFASENN
PPAVTETHPPEKRPKLQQNTSTATTSPPPPPPPPAFQLQPQFLQPLQPPGPVNQTPFSYT
IATTTQQQQQQQQQQQGPWIPGLTLLPTTSAPSDNNSYQKFQGQDGFYGTTNSPSSMTPA
TRQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaagcccaataatgacacctaagccgagtagaaaaatcacacggtggtcgttt
ccaagtttgttttcttcaactgctcaacttctccggcggtttctgggaggcgtcatcaga
cagaacggcgccgttattttccttttgcaatcgttggaccttatacctctacgcaacaat
aatctcctgctcctctctactcgtaaaggcgctgactttgaggtggtgggaacaatgggt
agttcgtttaatgctcaggtattagctgagaagcttgccaaactcaacagttctcaagca
agcatagagactttatcgcattggtgtatctttcacatgaacaaggcgaaacatgttgtg
gagacatgggggaggcagtttcactgctccccgcgcgagcaacgtttggcgtacctgtac
cttgcgaatgatatcttgcagaacagtaggcgaagaggttcggagtttgttggcgagttc
tggaatgtgctcccggatgctcttcgtgatgtgattgaaaatggtgatgactctgaaaga
aaatccgcacttcgattggttaatatatgggaagaaaggaaggtttttggatctagtgga
cagattctcaaagaagagattcttagaaagctgcctgataatggaggggtcgtgccactt
aagaagcaggcaaatgcaactccgttggagagagtagtgtctgctgttgaagctcttcac
ggtggtcagattaatgtggatgatattgttggaaaatgtactaatgttgtgggttacctt
gagaaagcagctcaggaggttgagagttcaggacacacccctggcgccgcggttgtaaag
gaggtgcagggacaacagaccatactgagagactgcatcgaacagctagtggcagtggaa
acatccagaacaagtcttatctctcatttgagagaggctttacaagaacaggaactcaag
ctggagcaagtccgtaaccaccttcagattgctcggtttcaatcagacagaacaggcgat
ctctgcaaacagcttatagaccatggcagtagcagctcacagcctcctgaagaagtcatc
aaagtctcattcactgcatctgcaccggttatgtttgcttccaacccaccagctcagcca
gtggtagtagtagacccgagaaaaaccgaagccgcagcaatggtagctaagctaaccgca
tcaacctcctcagccgagatgctctcctacgttctctcctcctttgcctctgaaaacaac
ccacccgctgtaacagaaactcacccgccagagaaaaggcccaagcttcaacagaacaca
tccacagccaccaccagtcccccaccgccgccgccgccaccagcattccagcttcagcct
cagttcttacagcctttacagcctcctggtcctgtaaaccagacgccattcagctacacc
atagcaacaaccactcaacaacaacaacaacaacaacaacaacagcaaggtccttggatt
cctggactcaccttgcttccaacaacctctgctccatcagataataattcataccaaaag
tttcaggggcaagatggtttctatggcactactaactcaccgtcctctatgacacctgct
actcggcagtag
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