KEGG   Brassica napus (rape): 106414139
Entry
106414139         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106414139
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106414139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106414139
   03041 Spliceosome [BR:bna03041]
    106414139
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106414139
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106414139
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106414139
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 106414139
NCBI-ProteinID: XP_048600240
LinkDB
Position
A2:24425088..24426218
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDAAVESVRDHDDPLTT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggaagaaaggaaacggtgttggatttggctaagtttgtggataagggcgtgcaa
gttaagctgactggtggtagacaagtcactggaactcttaaaggctacgatcagttgctg
aaccttgttctagatgctgcggtggagtctgttcgagatcatgatgatccattgacgact
actgaccagaccagacgccttggtttaattgtttgtcgtggaactgcggtgatgctcgtc
tcaccaactgatggaactgaagaaattgctaaccctttcgttcaaccagaggctgtctaa

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