Brassica napus (rape): 106414339
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Entry
106414339 CDS
T04128
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bna03012
]
106414339
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
eIF-5
106414339
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
106414339
NCBI-ProteinID:
XP_048594024
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All DBs
Position
A8:19685458..19693631
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AA seq
1036 aa
AA seq
DB search
MDRKNTSACRGDEDHPFALSFKGGENPKNKSYNVRFDLLGIEDYNEEAEDDVNVELSDEL
MLGRQVTEETNSKSEDLGENSRSKKKKKNKSGKTAHEEEDLDKILAELGITPVSPAQPEL
VAPSDCSKDGEEETVLSASSKKRKKKKDKDKKVYASSVEAKDEPSQPHKKVPKHILEMQE
MVARRKEAEEMKKKEEEEKLRKEEEERRIQEEREREAEEIKQKRKIREKEKMLKKKQEGG
ILTEKQKRDKAFKNKMLSDAGMLLASDKQGDSSKRPVYGNKRKPARTKANDSGSVQVKDH
ANVTATLHDIDSAVKEKKQEAGDEEDDWEAKSDDSVDIMGDYDDREDAPWLVVKKEIKDT
AAKAHCSGEDKLNTNSFVPCLFFNLGYNTGPVTSDRLALKAEVADKPKESRPKVDDATRP
KDATKRGNDSEVNEVAKESLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIG
ATYFPAENIRERTKELRPDAKLKVPGLFVIDTPGHESFSNLRSRGSNLCDIAILVVDIMH
GLEPQTIESLNLLRKRNTEFIVALNKVDRLYGWKTCKNAPIEKALALQSKDVVIEFNMRL
TQVITQFKEQGLNTEIYYKNKEMGDTFSIVPTSAISGEGIPDMLLYLVMWSQKTMVEKLT
FVDKVQCTVLEVKVIPGHGTTIDVVLVNGVLHEGDQIVACGSQGPIITTVRSLLTPHPMK
ELRVKGTYQHHREVKAAQCIKITAQGLEHAVAGTSLHVIGPDVDVDEAKKTAMEDMKSVM
SLVDKSGEGVYVQASTLGSLEALLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGVMLEKKK
EYATVLAFDVKITTEARELADNMGVKILSADIIYHLFDQFKGYVKDVRDEERKETASEVV
FPCVLKILPNHVFKRGNPIILGVEVIDGILKVGTPMCFLKEIGKSRVFVDLGRVASIHKD
KKPLDDAKKGQQVAIKIVASNPGEEKMFGEDFDIEDELVSHISRRSIDILKTLYRVRFDK
SLLFSRHFCRKYCSEN
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaagaacacgagcgcgtgtagaggagacgaagatcatccctttgccttgtcc
ttcaagggaggtgaaaaccctaagaataaatcatataatgtaaggtttgatctgcttggt
attgaagattacaacgaagaggcagaggatgatgttaatgttgaattgagtgatgagtta
atgcttggaagacaagttaccgaagaaactaatagtaagagtgaggatcttggggaaaac
tcaaggagtaagaaaaagaagaagaacaagagtggaaagactgcacatgaagaagaagat
ttggacaagattcttgcagaacttgggataactcctgtttcaccagcacaacctgaacta
gttgcaccttcagattgctcaaaggatggagaagaagagactgtcctgtcagcttcatca
aagaaaaggaaaaagaagaaggacaaggacaagaaagtgtatgcttcttccgtggaggct
aaggatgagccatcacagcctcataagaaagttcctaaacacattctagagatgcaagag
atggttgcgcggaggaaagaagccgaagagatgaagaagaaggaagaggaagagaagctg
aggaaagaggaagaggagcgacgaattcaggaagagcgagaaagggaagctgaagagatt
aaacagaagaggaagataagggaaaaggagaagatgctgaagaagaagcaagagggaggg
attctaactgagaagcagaagagggacaaggctttcaagaacaagatgttgtctgatgct
ggaatgcttcttgcttcagacaaacagggtgattcctcaaagcgtcctgtttacggcaac
aaaagaaaaccagctcggacaaaagcaaacgactctggttctgtccaggtgaaagatcat
gcaaatgtaacagctacgttgcatgacatagattcagctgtcaaggaaaagaaacaagaa
gctggtgatgaggaggatgattgggaagcaaaaagtgatgattctgttgatataatgggt
gattatgatgatcgggaagatgcaccttggcttgtggttaagaaagagataaaagacact
gctgcaaaggcccattgttcaggtgaggataaactaaacactaattcttttgtcccttgt
ctgttttttaatctaggttacaatacaggtcctgtcacctctgatagactagcattgaag
gctgaagttgcagacaagccaaaagaatctagacctaaggtggatgatgctactaggcca
aaggatgctactaaaaggggtaatgactcagaagttaatgaagttgctaaagaaagtctt
cggtctcccatttgctgcatcatgggccatgttgatactggtaaaaccaagctgttggat
tgcatcagaggaacaaatgttcaggaaggagaagcaggaggtatcactcagcagattggt
gcaacttatttccctgcagaaaacatccgtgagaggaccaaggagttaagacctgatgca
aaactcaaggtgccaggtctatttgttattgatacgccaggacacgagtcattctcaaat
ctacggtcaaggggttcaaacttgtgtgacattgcaattctagtggtggatataatgcat
ggtctagagccacaaactatagagtctcttaatcttttgagaaagaggaacacagagttc
attgttgccttgaataaggtggataggctatatgggtggaaaacatgcaagaatgctcct
atagagaaggctctggcactgcaatccaaagatgtggttattgaatttaacatgaggctt
actcaggttataacccagttcaaagaacaaggactcaacactgagatttattacaagaac
aaagaaatgggagacactttcagtattgtgcctactagtgctattagtggggaagggatt
ccagatatgttgctatatttggttatgtggtctcagaaaacaatggttgagaaacttaca
tttgttgacaaagtgcagtgtaccgtccttgaggtcaaagttattccaggccatggtaca
acaattgatgttgttttggtcaacggtgtactccatgaaggtgatcaaatcgttgcttgt
gggtcacagggaccaattataacaactgtcagatcactattgactcctcatcctatgaaa
gagctacgtgtgaagggtacatatcagcatcatagagaagtaaaggctgcgcaatgtatc
aagataactgcacagggccttgaacacgccgttgctggtacttccttacatgtgattgga
cctgatgtggacgtggacgaagccaagaaaacagccatggaagatatgaagtcagtcatg
agcttggttgacaaaagtggtgaaggagtttacgtacaagcttcaacgttaggatctttg
gaagcattactagagttcttgaagtcaccagatgtaaaaatacctgtaagtggtattggc
ctaggaccagtgcataaaaaggatatcatgaaggccggtgtaatgctagagaagaagaaa
gagtacgctacggttttggcttttgacgtgaagataactactgaggctcgcgaactagct
gacaacatgggagtcaagatcctctccgctgatattatctatcatctgtttgatcagttc
aagggttatgtcaaggatgtccgagatgaagaaaggaaagaaacagcatctgaagtagtg
tttccatgtgtccttaagattttaccaaaccatgtcttcaaaagaggaaacccaatcatc
cttggagtcgaggtcatcgatggtatactcaaggttggaactcccatgtgctttctaaaa
gagattgggaagtcgagagtgtttgtggaccttggtcgagttgcatctattcacaaagac
aagaagccacttgacgatgccaagaaaggccagcaggttgctattaagatcgttgcctct
aaccctggagaagagaaaatgtttggggaggactttgatatagaagacgagcttgtcagt
catatttctaggagatccatcgacatactcaaaacactctacagggtaaggtttgacaag
tctctcttgttctccaggcatttttgtcgaaaatattgttcggaaaattaa
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