Brassica napus (rape): 106414577
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Entry
106414577 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106414577
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106414577
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106414577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H
Xpo1
RanGAP1_C
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
106414577
NCBI-ProteinID:
XP_013710663
UniProt:
A0A816UFC1
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Position
C8:complement(23960001..23963613)
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AA seq
439 aa
AA seq
DB search
MYIFSENQEKQKVFSILLLPMYQIFFFFFLTTFHSYYYVSAQPPAPPLSNGDLVANFEPS
LAIVTGVLAIMFALTFVLLVYAKCCHMDLLSGSGDGRRQDRLIRQGFFFNRSTNSSARFS
GLDKTAIESLPMFRFSALKGSKQGLECSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE
QHATCPLCRNRVSVEEESSVYINSFRFLNESARREDSSLELYIEREEEEERRRRQREEVG
SSSRFSIGGSFRKILKLGHKEKPLLEQQGNDKDENKVMHKFNHRIFVSDVVFKNRWSNVS
SSDLMFLNSEMVSSISSERFSFRRSNEEDQRGNLRVEEDMESKLSSMKTMLLSESNDSGS
KSRSVMTETGRRSVSEITTVPRLSIAVHGDCSGPTAATASETEERRRRLWLPIARKTAQW
FANREKRNQINTTFQHFNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtacattttctcagaaaatcaagaaaagcaaaaggttttctctattcttcttcttccg
atgtatcaaatcttctttttcttctttcttacaaccttccacagttattactatgtctca
gctcagcctcctgctcctccgctcagtaacggcgatctcgtcgcaaacttcgagccgagt
ttagccatcgtcacaggagttctcgccatcatgttcgcactcactttcgtgctcctcgtc
tacgctaagtgctgccacatggatctcctatcaggttccggcgacggtaggcggcaagat
cgtctgatccgacaagggtttttcttcaaccggtcaactaactcctcagctcgattctcc
ggtttagacaagacagctatcgagtcacttcctatgtttagattctcagctttgaaagga
tcaaaacaagggcttgagtgttctgtttgtttgtctaaattcgaaagtgttgagattctt
aggttattgcctaaatgtcgtcacgctttccacatcggatgcatcgatcagtggcttgaa
cagcacgcaacgtgtcctctctgccgaaacagagtttcagtcgaagaagaatcctctgtt
tatataaacagttttcggttcttgaatgagtctgcgagaagagaagattcgagtttggag
ctttacatcgagagagaagaagaagaggagagaagaagaagacagagagaggaagttggt
agctcatcgagattcagcatcggagggagtttcaggaagattctaaaactaggtcataaa
gaaaaacccttgcttgagcaacaaggaaacgataaagacgagaacaaagtgatgcataag
ttcaatcacaggatatttgtatctgatgttgtgttcaagaatcgttggagcaacgtgagt
tcatcggatttgatgtttttgaattcggagatggttagttcgatctccagcgagagattc
tcatttaggagaagcaatgaagaggatcaaagaggtaacttgcgggtcgaggaagatatg
gagagcaagttgagttccatgaaaactatgttgttgtcggaaagcaacgactctggttcg
aaatcaagaagtgttatgaccgagacaggaagaagatcggtctccgagatcacaacggtt
cctagactcagtattgcggttcatggcgattgcagcggtccaaccgcagcgactgcgtct
gagacggaggagagaagacggcgtttgtggctgccgatcgctagaaaaaccgctcaatgg
tttgctaacagagaaaaaagaaatcaaattaatacaacattccaacactttaatgtttag
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