Brassica napus (rape): 106414740
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Entry
106414740 CDS
T04128
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bna03012
]
106414740
03029 Mitochondrial biogenesis [BR:
bna03029
]
106414740
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
MTIFs
106414740
Prokaryotic type
106414740
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
106414740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
IF2_N
GTP_EFTU_D2
Ras
RsgA_GTPase
DUF6115
Roc
Arf
Motif
Other DBs
NCBI-GeneID:
106414740
NCBI-ProteinID:
XP_013710793
UniProt:
A0A816UKF8
LinkDB
All DBs
Position
C8:28535371..28540373
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AA seq
1003 aa
AA seq
DB search
MPSMLVLVGTLPSLASLVSPGGGGGASVSSYALVKRVSLPRRSVKGAKKWLCRYSLSTST
TDFIAEQTVSLDSNSFEGSIEEDEGEIVLKQAPKPVLKPPVARVSSAPWSKEGKFDGEKE
ERSKVIESLGEVLDKAERLEIPKPVSKEGGEGFKPSQPSANSSNSKGDGFGTRKTKTMKS
VWRKGDAVAAVQKVVKESPKIDNKGMQGDAKSGTQLSPPQQPLRAQPQLQGRPMVAQPPV
KKPILKDHGMATRPSGPILKDVGMASKPSVSEEVDSSSQSKERKPILVDKFASKKKGVDP
VASQTVLAPTKPGKGPPSNKFRVEQRNKKNASANPRRRMAAEDDADEDASELNVSIPGKG
RKGRKWSKASRKAVRLQAARDAAPVKAEILEVEEEGMSIEDLAYNLAIGEGDILGYLYSK
GIRPDGVQTLDREMVRMICRDYDVEVLDADSVQVEEMAKKKESFDEEDLEKLEDRPPVIT
IMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAF
GAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGASPERVM
QELSSIGLMPEDWGGDVPMVQISALKGENIDDLLETVMLVAELQELKANPHRNAKGIVIE
AGLDKAKGPFATFIVQKGTLRRGDVIVCGEAFGKVRALFDHSGERVDEAGPSIPVQVIGL
NNVPIAGDEFEIVSSLDVAREMAEARAVSLRDERISAKAGDGKVTLSSLASAVSAKKMSG
LDLHQLNIILKVDVQGSIEAVKQALQVLPQENVTLKFLLQATGAVSNSDVDLASASEAII
FGFNVKASGSVKKAAENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRAT
FSSGSGRVAGCMVNEGKFVKDCGIKVIRKGKTVHVGVLDSLKRVKENVKEVSAGLECGIG
MDDYDDWIEGDTIEAFNAVQKRRTLEEASASMSAAIEEAGVEL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgatgctggttctcgtcggcacattgccgtcgttagcttctctggttagtcca
ggaggtggtggtggtgcgagtgtttcgtcgtacgcattagtaaaaagggtttctttgccg
aggagaagcgtcaaaggagctaagaaatggttgtgtagatattctctttccactagtact
actgacttcatcgctgagcaaactgtttctttagattctaactcttttgaaggaagtatt
gaagaggatgagggtgagatcgtgctcaagcaggctcctaagcctgtgttgaagccccct
gtggcgagggtgagttctgctccttggagtaaggagggtaagtttgatggagaaaaagaa
gagaggagtaaggttattgagtctcttggcgaagtgttggataaagctgagaggttggag
attccgaaaccggttagtaaagagggtggtgagggttttaagccgtcacagcctagtgct
aacagtagtaactccaaaggtgatggctttgggacacggaagacgaaaactatgaagagt
gtgtggcgtaagggtgatgctgttgcagctgtgcagaaagttgttaaggaatcacctaaa
attgataataagggaatgcagggtgatgccaaatcaggcactcaattgtcaccacctcag
caacctttaagagctcagccacagttacaaggcaggcctatggtagctcagccacctgta
aagaaacccattttaaaagatcatggtatggcaacgaggccttcaggtcccatcttaaaa
gatgttggtatggcgtcaaagccttcagtttctgaagaggttgattctagctcacaaagt
aaagaaaggaagcccattttggttgataagtttgcatccaagaaaaaaggtgttgatcct
gtggcctctcagactgtgttggctcctaccaagcctggaaagggtccaccttctaacaag
ttcagagttgagcaacgtaataaaaaaaatgcatcagctaatccaaggcgaagaatggct
gctgaagatgacgccgacgaagatgcatccgagttaaatgtctcaattccaggaaaaggt
agaaaagggagaaaatggagtaaagctagtaggaaggctgtaagactccaggctgccaga
gacgcagcacctgttaaagctgaaatcttagaggtagaggaagaaggcatgtccatcgag
gatttggcttacaacctagccataggtgaaggtgacatccttgggtatctatattcaaaa
gggattagacctgatggtgtgcagaccttggacagagagatggtgaggatgatttgtaga
gattacgatgttgaggtccttgatgctgattcagttcaagttgaagaaatggcaaagaag
aaggaaagttttgatgaagaagatttggaaaagttagaagacaggcctcctgtcatcacg
attatgggtcatgtggaccacggaaagaccactcttctggactatatcagaaaaagcaag
gttgctgcttcagaagcaggggggattacacaaggaattggtgcatataaggtgtcagtg
cctgttgatgggaagttgcagtcctgtgttttccttgatactcctggacacgaggcgttt
ggtgcaatgagagctcgcggagcacgggtcactgacatcgcaatcattgtggttgctgct
gatgatggaattcgacctcaaacaaatgaagcaatagctcacgcaaaggctgctggtgtc
cctatagtcatagctataaataagatagataaagacggagctagtccagagagagtaatg
caagagctttcttcaattggtttgatgcctgaagattggggtggtgatgtgccaatggtt
cagatcagtgcgttgaaaggcgagaatatcgatgatctgttggaaactgtcatgcttgtt
gcagagctgcaagagttgaaagcaaacccacacagaaatgccaagggcattgttattgag
gctggacttgataaagcgaaaggaccatttgcgacattcattgttcagaagggcacgttg
agaagaggggatgttattgtttgtggagaagctttcggaaaggtacgagctttatttgat
cacagcggcgaacgagttgatgaagctggaccttccatacctgtacaggtgattggttta
aataatgtacccattgctggtgacgaatttgagatcgtctcttcacttgatgtggcgcgt
gagatggcagaagcacgtgcagtatcactacgagatgaaagaatatctgcaaaggctggg
gatggtaaggtcaccctttcttccttggcttctgctgtatcagcgaaaaagatgtcaggc
ttagatttgcatcagcttaatatcatattgaaggtcgatgtacagggatccattgaagct
gtcaaacaagctctgcaagttctccctcaagagaatgtgaccttgaaatttttgctacaa
gcgacaggggctgtgagcaacagtgatgttgatctagcatcagcgagtgaagccatcatt
tttggatttaatgtcaaagcatctggttctgttaagaaagctgcggaaaacaaaggtgtt
gagatccgattatatcgagttatctatgaacttattgacgatgtacgaaacgcaatggaa
ggacttcttgagtctgttgaggaacaaataccaattggatcagcagaagttcgagctact
ttcagcagtggaagcggtcgtgtggctggatgcatggtgaacgaagggaagtttgtcaaa
gattgtggcatcaaggtgatccggaagggtaagactgtacatgttggtgtccttgattct
cttaagcgagttaaagaaaatgtgaaagaggtgagtgctggattagaatgtggtatcggt
atggatgactatgacgattggatcgaaggagacaccatcgaggcctttaacgcggttcaa
aagaggcgaacgcttgaagaagcatcagcttcaatgtctgctgcaatcgaagaggctgga
gttgaattgtaa
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