Brassica napus (rape): 106414799
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Entry
106414799 CDS
T04128
Name
(RefSeq) protein PELOTA 1
KO
K06965
protein pelota
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106414799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106414799
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106414799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
106414799
NCBI-ProteinID:
XP_013710833
LinkDB
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Position
C8:16644155..16648376
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AA seq
419 aa
AA seq
DB search
MRILRRDFVRDGPGSAKLMAEDSDDLWFTYNLIGPGDSVMAVTSRKVLRERGNSKRVDSE
RVDSKREDSDSDQRVDSKKRVGSKKRGDSKKRLDAELDDSKPLVSERLTLKLEVQVEEVN
YDKDGGVLRILGTNILENEHVPLGAYHSLELVLKRRFLLRKKIWDSLAIDTLNQAKHRIS
SDDLAVVLMQEGHAQIFLVGKSVGAPIETSIPNRKHAGYEAALKKFFENVVRAFVKHVDF
SVVRCVVIASPGFTKDQFHRHLLLEAERRQLKPITENKSRILLVHANSGYRHSLGEVLCD
PKVMKMIQDTKASKEVSAFRDFFTMFEKDPYRACYGPKHVEFAHEQKAIQTLLITDELFK
NSDVKERKKYVDFVESVKKLGGEAFIFSSMHVSGEQLAMHTGIAALLRFPLPGLDDVEM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctccgcagggattttgttcgtgatggaccaggaagcgctaaactgatggcg
gaggactcggatgatctctggtttacttataacttaattggccccggcgatagtgtaatg
gctgtcacatcgagaaaggttctgagagagagaggaaattctaaacgtgtagactctgaa
cgtgttgactctaaacgtgaagactctgactctgatcaacgtgttgactccaaaaaacgt
gtaggctctaaaaaacgtggtgactctaaaaaacgtttagacgctgagcttgacgactct
aaacctctagtgtctgaacgtctgacactgaagctagaagtacaagttgaggaggtaaac
tatgacaaagacggtggtgttttgcgcatacttgggacgaatatccttgagaacgagcac
gtaccgcttggtgcataccatagtttggagctcgtgctgaaacgacgttttctattgagg
aaaaaaatatgggactcattggctattgatacactcaaccaggcaaaacatcgtatctcc
agtgatgatttagctgtagttctaatgcaagaaggacatgcacaaatcttccttgtcgga
aaaagtgtgggtgcaccaatagaaacatcaattcctaatcgtaagcatgctggttacgag
gctgctttgaagaaattctttgagaacgttgtgcgtgcctttgtgaaacacgttgacttc
agtgtcgttcggtgtgtagtgatcgcaagtcctggctttacaaaggatcagtttcatcgc
cacttgttgttggaagcagagagaagacagttgaaacctattactgagaacaaatcacgt
atacttctggtgcatgcaaactccggatatagacatagccttggagaggttctgtgtgac
cccaaagtgatgaagatgatccaagatacaaaagcatcgaaagaggtgagcgctttcagg
gatttcttcaccatgttcgaaaaggatccatatcgggcatgctacggaccgaagcatgtg
gagtttgctcatgaacaaaaggcaatccaaacacttctcattacagatgagctgtttaaa
aattctgacgtgaaagaaaggaagaaatatgtggattttgtggagtcggtgaaaaaatta
ggaggagaggcttttatattttcttcgatgcatgtttcaggtgaacaactggcaatgcat
actggaattgcagctcttctcaggttccctttaccaggtctcgatgacgttgagatgtaa
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